clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF020K23 | Sequence | 539 | 010219 (7) | ref|XP_009791461.1| | 2e-45 | PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Nicotiana sylvestris] ref|XP | 739 | 010219 (7) | ref|XP_009595455.1| | 3e-41 | PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Nicotiana tomentosiformis] r |
JMFF036M05 | Sequence | 541 | 010219 (7) | ref|XP_009791461.1| | 8e-82 | PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Nicotiana sylvestris] ref|XP | 680 | 010219 (7) | ref|XP_009595455.1| | 4e-36 | PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Nicotiana tomentosiformis] r |
JMFN011A13 | Sequence | 624 | 010219 (7) | ref|XP_009791461.1| | 2e-98 | PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Nicotiana sylvestris] ref|XP | |||||
JMSF028H18 | Sequence | 659 | 010219 (7) | ref|XP_009791461.1| | 1e-108 | PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Nicotiana sylvestris] ref|XP | 729 | 010219 (7) | ref|XP_009595455.1| | 8e-47 | PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Nicotiana tomentosiformis] r |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010219============================================1205 14 ------------------------------------------->JMFF036M05 <-------------------------------------------------------rJMFF036M05 28 -------------------------------------------->JMFF020K23 <------------------------------------------------------------rJMFF020K23 49 ------------------------------------------------------>JMSF028H18 <------------------------------------------------------------rJMSF028H18
The following clones don't have the opposite end in this pair.
-------------------------------------------------->JMFN011A13-