| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF025D05 | Sequence | 608 | 011190 (11) | ref|XP_006358577.1| | 2e-55 | PREDICTED: tobamovirus multiplication protein 2A-like isoform X1 [Solanum tuber | 777 | 011190 (11) | ref|XP_004245872.1| | 2e-57 | PREDICTED: tobamovirus multiplication protein 2A [Solanum lycopersicum] |
| JMFF032C05 | Sequence | 764 | 011190 (11) | ref|XP_004245872.1| | 5e-58 | PREDICTED: tobamovirus multiplication protein 2A [Solanum lycopersicum] | |||||
| JMFF035I10 | Sequence | 421 | 011190 (11) | ref|XP_009590611.1| | 8e-22 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref | 751 | 011190 (11) | ref|XP_009590611.1| | 3e-56 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref |
| JMFF038K17 | Sequence | 420 | 011190 (11) | ref|XP_009590611.1| | 4e-24 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref | 295 | 011190 (11) | |||
| JMFF046L22 | Sequence | 419 | 011190 (11) | ref|XP_009590611.1| | 8e-22 | PREDICTED: tobamovirus multiplication protein 2A [Nicotiana tomentosiformis] ref | 402 | 011190 (11) | gb|KHG01123.1| | 2e-13 | hypothetical protein F383_00667 [Gossypium arboreum] |
| JMSF003A12 | Sequence | 787 | 011190 (11) | ref|XP_004245872.1| | 2e-67 | PREDICTED: tobamovirus multiplication protein 2A [Solanum lycopersicum] | |||||
| JMSF013M06 | Sequence | 786 | 011190 (11) | ref|XP_004245872.1| | 1e-58 | PREDICTED: tobamovirus multiplication protein 2A [Solanum lycopersicum] | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig011190============================================1253 16 ------------------------------->JMFF046L22 <-------------------------------rJMFF046L22 33 ---------------------------------------------->JMFF025D05 <------------------------------------------------------------rJMFF025D05 37 --------------------------------->JMFF038K17 <-----------------------rJMFF038K17 52 ------------------------------->JMFF035I10 <---------------------------------------------------------rJMFF035I10
The following clones don't have the opposite end in this pair.
<------------------------------------------------------------rJMFF032C05- <----------------------------------------------------------rJMSF003A12- <----------------------------------------------------------rJMSF013M06-