clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005L12 | Sequence | 736 | 006790 (10) | emb|CBI33350.3| | 1e-107 | unnamed protein product [Vitis vinifera] | |||||
JMFF006E24 | Sequence | 565 | 006790 (10) | ref|XP_004253006.1| | 5e-118 | PREDICTED: probable voltage-gated potassium channel subunit beta [Solanum lycop | 792 | 006790 (10) | ref|XP_004253006.1| | 3e-69 | PREDICTED: probable voltage-gated potassium channel subunit beta [Solanum lycop |
JMFF019K16 | Sequence | 562 | 006790 (10) | ref|XP_006349938.1| | 7e-112 | PREDICTED: probable voltage-gated potassium channel subunit beta-like [Solanum | 785 | 006790 (10) | emb|CBI33350.3| | 3e-81 | unnamed protein product [Vitis vinifera] |
JMFF020N14 | Sequence | 575 | 006790 (10) | ref|XP_006349938.1| | 1e-106 | PREDICTED: probable voltage-gated potassium channel subunit beta-like [Solanum | 763 | 006790 (10) | emb|CBI33350.3| | 1e-81 | unnamed protein product [Vitis vinifera] |
JMFF022P21 | Sequence | 762 | 006790 (10) | emb|CBI33350.3| | 1e-80 | unnamed protein product [Vitis vinifera] | |||||
JMFF023A19 | Sequence | 350 | 006790 (10) | ref|XP_004253006.1| | 3e-49 | PREDICTED: probable voltage-gated potassium channel subunit beta [Solanum lycop | 625 | 006790 (10) | ref|XP_010484116.1| | 5e-43 | PREDICTED: probable voltage-gated potassium channel subunit beta [Camelina sati |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006790============================================1471 36 -------------------------------------->JMFF020N14 <---------------------------------------------------rJMFF020N14 55 ------------------------------------->JMFF006E24 <-------------------------------------------rJMFF006E24 67 ----------------------->JMFF023A19 <----------------------------------------rJMFF023A19 67 ------------------------------------->JMFF019K16 <---------------------------------------------------rJMFF019K16
The following clones don't have the opposite end in this pair.
<---------------------------------------------------rJMFF022P21- <-------------------------------------------------rJMFF005L12-