| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005L12 | Sequence | 736 | 006790 (10) | emb|CBI33350.3| | 1e-107 | unnamed protein product [Vitis vinifera] | |||||
| JMFF006E24 | Sequence | 565 | 006790 (10) | ref|XP_004253006.1| | 5e-118 | PREDICTED: probable voltage-gated potassium channel subunit beta [Solanum lycop | 792 | 006790 (10) | ref|XP_004253006.1| | 3e-69 | PREDICTED: probable voltage-gated potassium channel subunit beta [Solanum lycop |
| JMFF019K16 | Sequence | 562 | 006790 (10) | ref|XP_006349938.1| | 7e-112 | PREDICTED: probable voltage-gated potassium channel subunit beta-like [Solanum | 785 | 006790 (10) | emb|CBI33350.3| | 3e-81 | unnamed protein product [Vitis vinifera] |
| JMFF020N14 | Sequence | 575 | 006790 (10) | ref|XP_006349938.1| | 1e-106 | PREDICTED: probable voltage-gated potassium channel subunit beta-like [Solanum | 763 | 006790 (10) | emb|CBI33350.3| | 1e-81 | unnamed protein product [Vitis vinifera] |
| JMFF022P21 | Sequence | 762 | 006790 (10) | emb|CBI33350.3| | 1e-80 | unnamed protein product [Vitis vinifera] | |||||
| JMFF023A19 | Sequence | 350 | 006790 (10) | ref|XP_004253006.1| | 3e-49 | PREDICTED: probable voltage-gated potassium channel subunit beta [Solanum lycop | 625 | 006790 (10) | ref|XP_010484116.1| | 5e-43 | PREDICTED: probable voltage-gated potassium channel subunit beta [Camelina sati |
This contig is upended
. : . : . : . : . : . :
JMFF020N14- ATTATTTAGTGGGTTTTCCTAAAATATCAAT
____________________________________________________________
consensus ATTATTTAGTGGGTTTTCCTAAAATATCAAT
. : . : . : . : . : . :
JMFF023A19- ACGCTCTGGGCGGTTCTTCACTCGGACAGTCACACTCTTCTTATCGGCGGCGACTGGAG
JMFF020N14- CACGCTCTGGGCGGTTCTTCACTCGGACAGTCACACTCTTCTTATCGGCGGCGACTGGAG
JMFF019K16- ACGCTCTGGGCGGTTCTTCACTCGGACAGTCACACTCTTCTTATCGGCGGCGACTGGAG
JMFF006E24- GGACAGTCACACTCTTCTTATCGGCGGCGACTGGAG
____________________________________________________________
consensus CACGCTCTGGGCGGTTCTTCACTCGGACAGTCACACTCTTCTTATCGGCGGCGACTGGAG
. : . : . : . : . : . :
JMFF023A19- AGCCAAAATCGAATCCTAGAAGAATGCAGATGCAGTACAAGAATCTGGGCAGATCCGGGC
JMFF020N14- AGCCAAAATCGAATCCTAGAAGAATGCAGATGCAGTACAAGAATCTGGGCAGATCCGGGC
JMFF019K16- AGCCAAAATCGAATCCTAGAAGAATGCAGATGCAGTACAAGAATCTGGGCAGATCCGGGC
JMFF006E24- AGCCAAAATCGAATCCTAGAAGAATGCAGATGCAGTACAAGAATCTGGGCAGATCCGGGC
____________________________________________________________
consensus AGCCAAAATCGAATCCTAGAAGAATGCAGATGCAGTACAAGAATCTGGGCAGATCCGGGC
. : . : . : . : . : . :
JMFF023A19- TGAAAGTTTCCCAGCTCTCTTTTGGCGCCTGGGTTACTTTCGGCAACCAGCTGGACGTGA
JMFF020N14- TGAAAGTTTCCCAGCTCTCTTTTGGCGCCTGGGTTACTTTCGGCAACCAGCTGGACGTGA
JMFF019K16- TGAAAGTTTCCCAGCTCTCTTTTGGCGCCTGGGTTACTTTCGGCAACCAGCTGGACGTGA
JMFF006E24- TGAAAGTTTCCCAGCTCTCTTTTGGCGCCTGGGTTACTTTCGGCAACCAGCTGGACGTGA
____________________________________________________________
consensus TGAAAGTTTCCCAGCTCTCTTTTGGCGCCTGGGTTACTTTCGGCAACCAGCTGGACGTGA
. : . : . : . : . : . :
JMFF023A19- AGGAGGCGAAGTCCATCCTGCAGTGCTGCCGCGACCACGGCGTGAATTTCTTCGACAACG
JMFF020N14- AGGAGGCGAAGTCCATCCTGCAGTGCTGCCGCGACCACGGCGTGAATTTCTTCGACAACG
JMFF019K16- AGGAGGCGAAGTCCATCCTGCAGTGCTGCCGCGACCACGGCGTGAATTTCTTCGACAACG
JMFF006E24- AGGAGGCGAAGTCCATCCTGCAGTGCTGCCGCGACCACGGCGTGAATTTCTTCGACAACG
____________________________________________________________
consensus AGGAGGCGAAGTCCATCCTGCAGTGCTGCCGCGACCACGGCGTGAATTTCTTCGACAACG
. : . : . : . : . : . :
JMFF023A19- CCGAGGTGTACGCCAATGGCCGCGCCGAGGAGATCATGGGCCAGGCCATCCGGGAGCTGG
JMFF020N14- CCGAGGTGTACGCCAATGGCCGCGCCGAGGAGATCATGGGCCAGGCCATCCGGGAGCTGG
JMFF019K16- CCGAGGTGTACGCCAATGGCCGCGCCGAGGAGATCATGGGCCAGGCCATCCGGGAGCTGG
JMFF006E24- CCGAGGTGTACGCCAATGGCCGCGCCGAGGAGATCATGGGCCAGGCCATCCGGGAGCTGG
____________________________________________________________
consensus CCGAGGTGTACGCCAATGGCCGCGCCGAGGAGATCATGGGCCAGGCCATCCGGGAGCTGG
. : . : . : . : . : . :
JMFF023A19- GGTGGAAGCGCTCCGACATCGTCGTNCTCCACCAAGATCTTCTGGGGCGG
JMFF020N14- GGTGGAAGCGCTCCGACATCGTCGT-CTCCACCAAGATCTTCTGGGGCGGCCCCGGACCC
JMFF019K16- GGTGGAAGCGCTCCGACATCGTCGT-CTCCACCAAGATCTTCTGGGGCGGCCCCGGACCC
JMFF006E24- GGTGGAAGCGCTCCGACATCGTCGT-CTCCACCAAGATCTTCTGGGGCGGCCCCGGACCC
____________________________________________________________
consensus GGTGGAAGCGCTCCGACATCGTCGT-CTCCACCAAGATCTTCTGGGGCGGCCCCGGACCC
. : . : . : . : . : . :
JMFF020N14- AATGACAAGGGCTTGTCCCGGAAACACATCGTGGAGGGCACCAAGGCCTCCCTCAAGAGG
JMFF019K16- AATGACAAGGGCTTGTCCCGGAAACACATCGTGGAGGGCACCAAGGCCTCCCTCAAGAGG
JMFF006E24- AATGACAAGGGCTTGTCCCGGAAACACATCGTGGAGGGCACCAAGGCCTCCCTCAAGAGG
____________________________________________________________
consensus AATGACAAGGGCTTGTCCCGGAAACACATCGTGGAGGGCACCAAGGCCTCCCTCAAGAGG
. : . : . : . : . : . :
JMFF020N14- CTCGATATGGATTATGTGGACTTGATCTACTGCCACCGCCCCGATACCAGTACCCCCATT
JMFF019K16- CTCGATATGGATTATGTGGACTTGATCTACTGCCACCGCCCCGATACCAGTACCCCCATT
JMFF006E24- CTCGATATGGATTATGTGGACTTGATCTACTGCCACCGCCCCGATACCAGTACCCCCATT
____________________________________________________________
consensus CTCGATATGGATTATGTGGACTTGATCTACTGCCACCGCCCCGATACCAGTACCCCCATT
. : . : . : . : . : . :
JMFF020N14- GAGGAGACGGTTAGGGCTATGAACTATGTGATCGATAAGGGTTGGGCTTTTTACTGGGGA
JMFF019K16- GAGGAGACGGTTAGGGCTATGAACTATGTGATCGATAAGGGTTGGGCTTTTTACTGGGGA
JMFF006E24- GAGGAGACGGTTAGGGCTATGAACTATGTGATCGATAAGGGTTGGGCTTTTTACTGGGGA
rJMFF005L12+ GGA
____________________________________________________________
consensus GAGGAGACGGTTAGGGCTATGAACTATGTGATCGATAAGGGTTGGGCTTTTTACTGGGGA
. : . : . : . : . : . :
JMFF020N14- ACTAG
JMFF019K16- ACTAGCGAGTGGTCGGCGCAGCA
JMFF006E24- ACTAGCGAGTGGTCGGCGCAGCAGATCACTGAGGCTTGGAGTGTGGCTCA
rJMFF005L12+ ACTAGCGAGTGGTCGGCGCAGCAGATCACTGAGGCTTGGAGTGTGGCTCAGCGATTGGAT
____________________________________________________________
consensus ACTAGCGAGTGGTCGGCGCAGCAGATCACTGAGGCTTGGAGTGTGGCTCAGCGATTGGAT
. : . : . : . : . : . :
rJMFF005L12+ CTCGTTGGACCCATTGTTGAACAGCCCGAGTATAATCTCCTCTCTCGCCATAAGGTTGAA
rJMFF022P21+ CTCGCCATAAGGTTGAA
rJMFF020N14+ CTCGCCATAAGGTTGAA
rJMFF019K16+ CTCGCCATAAGGTTGAA
____________________________________________________________
consensus CTCGTTGGACCCATTGTTGAACAGCCCGAGTATAATCTCCTCTCTCGCCATAAGGTTGAA
. : . : . : . : . : . :
rJMFF005L12+ GCTGAGTACCTCCCTCTGTATAGTAATTACGGTATTGGTCTCACTACATGGAGTCCACTT
rJMFF022P21+ GCTGAGTACCTCCCTCTGTATAGTAATTACGGTATTGGTCTCACTACATGGAGTCCACTT
rJMFF020N14+ GCTGAGTACCTCCCTCTGTATAGTAATTACGGTATTGGTCTCACTACATGGAGTCCACTT
rJMFF019K16+ GCTGAGTACCTCCCTCTGTATAGTAATTACGGTATTGGTCTCACTACATGGAGTCCACTT
____________________________________________________________
consensus GCTGAGTACCTCCCTCTGTATAGTAATTACGGTATTGGTCTCACTACATGGAGTCCACTT
. : . : . : . : . : . :
rJMFF005L12+ GCTTCTGGAGTGCTGACCGGAAAGTATACCTCTGGAAACATTCCACCTGATAGTAGGTTT
rJMFF022P21+ GCTTCTGGAGTGCTGACCGGAAAGTATACCTCTGGAAACATTCCACCTGATAGTAGGTTT
rJMFF020N14+ GCTTCTGGAGTGCTGACCGGAAAGTATACCTCTGGAAACATTCCACNTGATAGTAGGTTT
rJMFF019K16+ GCTTCTGGAGTGCTGACCGGAAAGTATACCTCTGGAAACATTCCACCTGATAGTAGGTTT
____________________________________________________________
consensus GCTTCTGGAGTGCTGACCGGAAAGTATACCTCTGGAAACATTCCACCTGATAGTAGGTTT
. : . : . : . : . : . :
rJMFF005L12+ GCTCTGGAAAATTACAAGAATCTTGCTAGTAGGTCATTGGTGGATGACGTGTTGAAGAAA
rJMFF022P21+ GCTCTGGAAAATTACAAGAATCTTGCTAGTAGGTCATTGGTGGATGACGTGTTGAAGAAA
rJMFF020N14+ GCTCTGGAAAATTACAAGAATCTTGCTAGTAGGTCATTGGTGGATGACGTGTTGAAGAAA
rJMFF019K16+ GCTCTGGAAAATTACAAGAATCTTGCTAGTAGGTCATTGGTGGATGACGTGTTGAAGAAA
rJMFF023A19+ TGCTAGTAGGTCATTGGTGGATGACGTGTTGAAGAAA
rJMFF006E24+ AGAATCTTGCTAGTAGGTCATTGGTGGATGACGTGTTGAAGAAA
____________________________________________________________
consensus GCTCTGGAAAATTACAAGAATCTTGCTAGTAGGTCATTGGTGGATGACGTGTTGAAGAAA
. : . : . : . : . : . :
rJMFF005L12+ GTGAACGGATTGAAACCAATTGCTGATGAGTTGGGTGTGACTTTGGCACAACTCGCAATT
rJMFF022P21+ GTGAACGGATTGAAACCAATTGCTGATGAGTTGGGTGTGACTTTGGCACAACTCGCAATT
rJMFF020N14+ GTGAACGGATTGAAACCAATTGCTGATGAGTTGGGTGTGACTTTGGCACAACTCGCAATT
rJMFF019K16+ GTGAACGGATTGAAACCAATTGCTGATGAGTTGGGTGTGACTTTGGCACAACTCGCAATT
rJMFF023A19+ GTGAACGGATTGAAACCAATTGCTGATGAGTTGGGTGTGACTTTGGCACAACTCGCAATT
rJMFF006E24+ GTGAACGGATTGAAACCAATTGCTGATGAGTTGGGTGTGACTTTGGCACAACTCGCAATT
____________________________________________________________
consensus GTGAACGGATTGAAACCAATTGCTGATGAGTTGGGTGTGACTTTGGCACAACTCGCAATT
. : . : . : . : . : . :
rJMFF005L12+ GCGTGGTGTGCTACGAATCCCAATGTTTCATCTGTTATTACTGGCGCCACCAAAGAGTCT
rJMFF022P21+ GCGTGGTGTGCTACGAATCCCAATGTTTCATCTGTTATTACTGGCGCCACCAAAGAGTCT
rJMFF020N14+ GCGTGGTGTGCTACGAATCCCAATGTTTCATCTGTTATTACTGGCGCCACCAAAGAGTCT
rJMFF019K16+ GCGTGGTGTGCTACGAATCCCAATGTTTCATCTGTTATTACTGGCGCCACCAAAGAGTCT
rJMFF023A19+ GCGTGGTGTGCTACGAATCCCAATGTTTCATCTGTTATTACTGGCGCCACCAAAGAGTCT
rJMFF006E24+ GCGTGGTGTGCTACGAATCCCAATGTTTCATCTGTTATTACTGGCGCCACCAAAGAGTCT
____________________________________________________________
consensus GCGTGGTGTGCTACGAATCCCAATGTTTCATCTGTTATTACTGGCGCCACCAAAGAGTCT
. : . : . : . : . : . :
rJMFF005L12+ CAGATTAAAGAGAACATGAAAGCTATTGAAGCCATTCCCAAGCTAGCACCCGTGATGGAT
rJMFF022P21+ CAGATTAAAGAGAACATGAAAGCTATTGAAGCCATTCCCAAGCTAGCACCCGTGATGGAT
rJMFF020N14+ CAGATTAAAGAGAACATGAAAGCTATTGAAGCCATTCCCAAGCTAGCACCCGTGATGGAT
rJMFF019K16+ CAGATTAAAGAGAACATGAAAGCTATTGAAGCCATTCCCAAGCTAGCACCCGTGATGGAT
rJMFF023A19+ CAGATTAAAGAGAACATGAAAGCTATTGAAGCCATTCCCAAGCTAGCACCCGTGATGGAT
rJMFF006E24+ CAGATTAAAGAGAACATGAAAGCTATTGAAGCCATTCCCAAGCTAGCACCCGTGATGGAT
____________________________________________________________
consensus CAGATTAAAGAGAACATGAAAGCTATTGAAGCCATTCCCAAGCTAGCACCCGTGATGGAT
. : . : . : . : . : . :
rJMFF005L12+ AAAATTGAAGCTGCAGTTCAAACGAAACCAAAGCGCCCAGATTCTTATCGCTAGGTGCGC
rJMFF022P21+ AAAATTGAAGCTGCAGTTCAAACGAAACCAAAGCGCCCAGATTCTTATCGCTAGGTGCGC
rJMFF020N14+ AAAATTGAAGCTGCAGTTCAAACGAAACCAAAGCGCCCAGATTCTTATCGCTAGGTGCGC
rJMFF019K16+ AAAATTGAAGCTGCAGTTCAAACGAAACCAAAGCGCCCAGATTCTTATCGCTAGGTGCGC
rJMFF023A19+ AAAATTGAAGCTGCAGTTCAAACGAAACCAAAGCGCCCAGATTCTTATCGCTAGGTGCGC
rJMFF006E24+ AAAATTGAAGCTGCAGTTCAAACGAAACCAAAGCGCACAGATTCTTATCGCTAGGTGCGC
____________________________________________________________
consensus AAAATTGAAGCTGCAGTTCAAACGAAACCAAAGCGCCCAGATTCTTATCGCTAGGTGCGC
. : . : . : . : . : . :
rJMFF005L12+ TGCTACATACACGAAGTCCTTAGTTCTAATATACATCGCTACACAGCCATTGATTTTCAT
rJMFF022P21+ TGCTACATACACGAAGTCCTTAGTTCTAATATACATCGCTACACAGCCATTGATTTTCAT
rJMFF020N14+ TGCTACATACACGAAGTCCTTAGTTCTAATATACATCGCTACACAGCCATTGATTTTCAT
rJMFF019K16+ TGCTACATACACGAAGTCCTTAGTTCTAATATACATCGCTACACAGCCATTGATTTTCAT
rJMFF023A19+ TGCTACATACACGAAGTCCTTAGTTCTAATATACATCGCTACACAGCCATTGATTTTCAT
rJMFF006E24+ TGCTACATACACGAAGTCCTTAGTTCTAATATACATCGCTACACAGCCATTGATTTTCAT
____________________________________________________________
consensus TGCTACATACACGAAGTCCTTAGTTCTAATATACATCGCTACACAGCCATTGATTTTCAT
. : . : . : . : . : . :
rJMFF005L12+ TCCTGGCTTTCTTTGTACCTTTTGGTTTATTTCTGCAACAGAACTTTGTCGAGAACAGCA
rJMFF022P21+ TCCTGGCTTTCTTTGTACCTTTTGGTTTATTTCTGCAACAGAACTTTGTCGAGAACAGCA
rJMFF020N14+ TCCTGGCTTTCTTTGTACCTTTTGGTTTATTTCTGCAACAGAACTTTGTCGAGAACAGCA
rJMFF019K16+ TCCTGGCTTTCTTTGTACCTTTTGGTTTATTTCTGCAACAGAACTTTGTCGAGAACAGCA
rJMFF023A19+ TCCTGGCTTTCTTTGTACCTTTTGGTTTATTTCTGCAACAGAACTTTGTCGAGAACAGCA
rJMFF006E24+ TCCTGGCTTTCTTTGTACCTTTTGGTTTATTTCTGCAACAGAACTTTGTCGAGAACAGCA
____________________________________________________________
consensus TCCTGGCTTTCTTTGTACCTTTTGGTTTATTTCTGCAACAGAACTTTGTCGAGAACAGCA
. : . : . : . : . : . :
rJMFF005L12+ TGCTATGCTGCTTTTGGTATTTTCATTTCAGTGGGTGCAATTGTGTTTGATGGTGGACAT
rJMFF022P21+ TGCTATGCTGCTTTTGGTATTTTCATTTCAGTGGGTGCAATTGTGTTTGATGGTGGACAT
rJMFF020N14+ TGCTATGCTGCTTTTGGTATTTTCATTTCAGTGGGTGCAATTGTGTTTGATGGTGGACAT
rJMFF019K16+ TGCTATGCTGCTTTTGGTATTTTCATTTCAGTGGGTGCAATTGTGTTTGATGGTGGACAT
rJMFF023A19+ TGCTATGCTGCTTTTGGTATTTTCATTTCAGTGGGTGCAATTGTGTTTGATGGTGGACAT
rJMFF006E24+ TGCTATGCTGCTTTTGGTATTTTCATTTCAGTGGGTGCAATTGTGTTTGATGGTGGACAT
____________________________________________________________
consensus TGCTATGCTGCTTTTGGTATTTTCATTTCAGTGGGTGCAATTGTGTTTGATGGTGGACAT
. : . : . : . : . : . :
rJMFF005L12+ ATTTGT
rJMFF022P21+ ATTTGTTGAAAACTGCATAAAGTTGGGTTGTACATTGTTGGTTTAATGGCTTCTGGTTTA
rJMFF020N14+ ATTTGTTGAAAACTGCATAAAGTTGGGTTGTACATTGTTGGTTTAATGGCTTCTGGTTTA
rJMFF019K16+ ATTTGTTGAAAACTGCATAAAGTTGGGTTGTACATTGTTGGTTTAATGGCTTCTGGTTTA
rJMFF023A19+ ATTTGTTGAAAACTGCATAAAGTTGGGTTGTACATTGTTGGTTTAATGGCTTCTGGTTTA
rJMFF006E24+ ATTTGTTGAAAACTGCATAAAGTTGGGTTGTACATTGTTGGTTTAATGGCTTCTGGTTTA
____________________________________________________________
consensus ATTTGTTGAAAACTGCATAAAGTTGGGTTGTACATTGTTGGTTTAATGGCTTCTGGTTTA
. : . : . : . : . : . :
rJMFF022P21+ TATTACTCCATATTGTTTTTAATCTAGTTTGTATTTGTCTCCATGTACTACTGGAAAACA
rJMFF020N14+ TATTACTCCATATTGTTTTTAATCTAGTTTGTATTTGTCTCCATGTACTACTGGAAAACA
rJMFF019K16+ TATTACTCCATATTGTTTTTAATCTAGTTTGTATTTGTCTCCATGTACTACTGGAAAACA
rJMFF023A19+ TATTACTCCATATTGTTTTTAATCTAGTTTGTATTTGTCTCCATGTACTACTGGAAAACA
rJMFF006E24+ TATTACTCCATATTGTTTTTAATCTAGTTTGTATTTGTCTCCATGTACTACTGGAAAACA
____________________________________________________________
consensus TATTACTCCATATTGTTTTTAATCTAGTTTGTATTTGTCTCCATGTACTACTGGAAAACA
. : . : . : . : . : . :
rJMFF022P21+ AACAATTTGGCAGTTGCCTGGATCT
rJMFF020N14+ AACAATTTGGCAGTTGCCTGGATCT
rJMFF019K16+ AACAATTTGGCAGTTGCCTGGATCT
rJMFF023A19+ AACAATTTGGCAGTTGCCTGGATCT
rJMFF006E24+ AACAATTTGGCAGTTGCCTGGATCTTGGAAATGGTTGTTTCCCAGAAGCTTAAAACTAGT
____________________________________________________________
consensus AACAATTTGGCAGTTGCCTGGATCTTGGAAATGGTTGTTTCCCAGAAGCTTAAAACTAGT