clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF002K14 | Sequence | 389 | 003992 (19) | ref|XP_008382359.1| | 73.6 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | |||||
JMFF017M20 | Sequence | 423 | 003992 (19) | ref|XP_008382359.1| | 73.9 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | 412 | 003992 (19) | ref|XP_008382359.1| | 74.3 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] |
JMFF026F02 | Sequence | 517 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | 476 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] |
JMFF047B05 | Sequence | 406 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | 432 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] |
JMFF048E11 | Sequence | 406 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | 432 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] |
JMFN003D24 | Sequence | 508 | 003992 (19) | ref|XP_008382359.1| | 74.3 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | |||||
JMFN011H21 | Sequence | 504 | 003992 (19) | ref|XP_008382359.1| | 74.3 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | |||||
JMFN015C19 | Sequence | 283 | 003992 (19) | ||||||||
JMFN018G01 | Sequence | 470 | 003992 (19) | ref|XP_007131741.1| | 3e-17 | hypothetical protein PHAVU_011G038100g [Phaseolus vulgaris] gb|ESW03735.1| hypot | |||||
JMFN028N02 | Sequence | 505 | 003992 (19) | ref|XP_008382359.1| | 73.6 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | |||||
JMFN038I10 | Sequence | 516 | 003992 (19) | ref|XP_008382359.1| | 74.7 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | |||||
JMSF019A05 | Sequence | 347 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | 493 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] |
JMSF039L20 | Sequence | 516 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] | 470 | 003992 (19) | ref|XP_008382359.1| | 75.1 | PREDICTED: uncharacterized protein LOC103445151 [Malus domestica] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003992============================================ 554 62 ------------------------------------------------------------->JMSF019A05 <----------------------------------------------------------------------------------------rJMSF019A05 78 ------------------------------------------------------------------------------------------>JMFF026F02 <-------------------------------------------------------------------------------------rJMFF026F02 94 ------------------------------------------------------------------------------------------->JMSF039L20 <----------------------------------------------------------------------------------rJMSF039L20 146 ------------------------------------------------------------------------>JMFF047B05 <-------------------------------------------------------------------------rJMFF047B05 146 ------------------------------------------------------------------------>JMFF048E11 <-------------------------------------------------------------------------rJMFF048E11 163 -------------------------------------------------------------------------->JMFF017M20 <-------------------------------------------------------------------------rJMFF017M20
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------------>JMFN018G01- ------------------------------------------------------------------------------------------>JMFN011H21- <-------------------------------------------------------------------rJMFF002K14- -------------------------------------------------->JMFN015C19- ------------------------------------------------------------------------------------------>JMFN028N02- ------------------------------------------------------------------------------------------->JMFN003D24- -------------------------------------------------------------------------------------------->JMFN038I10-