Contig 003992:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002K14Sequence389003992 (19)ref|XP_008382359.1|73.6PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMFF017M20Sequence423003992 (19)ref|XP_008382359.1|73.9PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]412003992 (19)ref|XP_008382359.1|74.3PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMFF026F02Sequence517003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]476003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMFF047B05Sequence406003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]432003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMFF048E11Sequence406003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]432003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMFN003D24Sequence508003992 (19)ref|XP_008382359.1|74.3PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMFN011H21Sequence504003992 (19)ref|XP_008382359.1|74.3PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMFN015C19Sequence283003992 (19)
JMFN018G01Sequence470003992 (19)ref|XP_007131741.1|3e-17hypothetical protein PHAVU_011G038100g [Phaseolus vulgaris] gb|ESW03735.1| hypot
JMFN028N02Sequence505003992 (19)ref|XP_008382359.1|73.6PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMFN038I10Sequence516003992 (19)ref|XP_008382359.1|74.7PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMSF019A05Sequence347003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]493003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]
JMSF039L20Sequence516003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]470003992 (19)ref|XP_008382359.1|75.1PREDICTED: uncharacterized protein LOC103445151 [Malus domestica]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN015C19+ GATGCAACAAAAA
JMFN011H21+ AGATGCAACAAAAA
JMFN003D24+ GATGCAACAAAAA
JMFN028N02+ GCAACAAAAA
JMFN038I10+ GATGCAACAAAAA
                      ____________________________________________________________
consensus AGATGCAACAAAAA
 
. : . : . : . : . : . :
JMFN015C19+ CATGTAACGCTTGACAAGAAGATAGGAACCAATATACAGACGTTTACACCTCTGACAAAT
JMFN011H21+ CATGTAACGCTTGACAAGAAGATAGGAACCAATATACAAACGTTTACACCTCTGACAAAT
JMFN003D24+ CATGTAACGCTTGACAAGAAGATAGGAACCAATATACAAACGTTTACACCTCTGACAAAT
JMFN028N02+ CATGTAACGCTTGACAAGAAGATAGGAACCAATATACAAACGTTTACACCTCTGACAAAT
JMFN038I10+ CATGTAACGCTTGACAAGAAGATAGGAACCAATATACAAACGTTTACACCTCTGACAAAT
rJMSF039L20- AAT
JMFN018G01+ GGAACCAATATACAAACGTTTACACCTCTGACAAAT
JMSF039L20+ TTGACAAGAAGATAGGAACCAATATACAAACGTTTACACCTCTGACAAAT
rJMFF026F02- TTACACCTCTGACAAAT
JMFF026F02+ CAAGAAGATAGGAACCAATATACAAACGTTTACACCTCTGACAAAT
rJMSF019A05- ACCAATATACAAACGTTTACACCTCTGACAAAT
                      ____________________________________________________________
consensus CATGTAACGCTTGACAAGAAGATAGGAACCAATATACAAACGTTTACACCTCTGACAAAT
 
. : . : . : . : . : . :
JMFN015C19+ GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
JMFN011H21+ GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
JMFN003D24+ GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
JMFN028N02+ GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
JMFN038I10+ GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
rJMSF039L20- GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
JMFN018G01+ GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
rJMFF048E11- TTTGGAGTTTGGGCAATCATAA
rJMFF047B05- TTTGGAGTTTGGGCAATCATAA
JMFF047B05+ GGAGTTTGGGCAATCATAA
JMFF048E11+ GGAGTTTGGGCAATCATAA
JMSF039L20+ GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
rJMFF026F02- GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
JMFF026F02+ GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
rJMSF019A05- GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
JMFF017M20+ TTTGGGCAATCATAA
                      ____________________________________________________________
consensus GAAAAACTTGTGAAGCAAGAGCAAAAAGTTTTGTTCCCTTTGGAGTTTGGGCAATCATAA
 
. : . : . : . : . : . :
JMFN015C19+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMFN011H21+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMFN003D24+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMFN028N02+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMFN038I10+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
rJMSF039L20- TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMFN018G01+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
rJMFF048E11- TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
rJMFF047B05- TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMFF047B05+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMFF048E11+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
rJMFF002K14- ATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMSF039L20+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
rJMFF026F02- TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMFF026F02+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
rJMSF019A05- TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
JMSF019A05+ TTAACCA
JMFF017M20+ TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
rJMFF017M20- GAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
                      ____________________________________________________________
consensus TGTATTAAGAACTTATTTGATAATAAATGTAATTCACAAGCAAAATTGAACAGTTAACCA
 
. : . : . : . : . : . :
JMFN015C19+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFN011H21+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFN003D24+ GTAGAATATGATTGTCCTACGCACCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFN028N02+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFN038I10+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
rJMSF039L20- GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFN018G01+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
rJMFF048E11- GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
rJMFF047B05- GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFF047B05+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFF048E11+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
rJMFF002K14- GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMSF039L20+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
rJMFF026F02- GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFF026F02+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
rJMSF019A05- GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMSF019A05+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
JMFF017M20+ GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
rJMFF017M20- GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
                      ____________________________________________________________
consensus GTAGAATATGATTGTCCTACGCATCAAGCGACAATAAGACATGTGAAAGGGGGGTCTCTC
 
. : . : . : . : . : . :
JMFN015C19+ AAATA-TATTTTGATCAGGCTGCAGCATCTC
JMFN011H21+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMFN003D24+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMFN028N02+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMFN038I10+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
rJMSF039L20- AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMFN018G01+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
rJMFF048E11- AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
rJMFF047B05- AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMFF047B05+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMFF048E11+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
rJMFF002K14- AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMSF039L20+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
rJMFF026F02- AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMFF026F02+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
rJMSF019A05- AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMSF019A05+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
JMFF017M20+ AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
rJMFF017M20- AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
                      ____________________________________________________________
consensus AAATATTATTTTGATCAGGCTGCAGCATCTCCACAATATCCACTTCAGTGATGTGCCTTT
 
. : . : . : . : . : . :
JMFN011H21+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMFN003D24+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMFN028N02+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMFN038I10+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
rJMSF039L20- GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMFN018G01+ GCTTCCGCCTTTTTGTGAGAC-TTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
rJMFF048E11- GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
rJMFF047B05- GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMFF047B05+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMFF048E11+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
rJMFF002K14- GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMSF039L20+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
rJMFF026F02- GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMFF026F02+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
rJMSF019A05- GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMSF019A05+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
JMFF017M20+ GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
rJMFF017M20- GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
                      ____________________________________________________________
consensus GCTTCCGCCTTTTTGTGAGACTTTGCCTTGGCCCTGAGATACTTGAGCTTTACGTTTCCG
 
. : . : . : . : . : . :
JMFN011H21+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMFN003D24+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMFN028N02+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMFN038I10+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
rJMSF039L20- TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMFN018G01+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
rJMFF048E11- TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
rJMFF047B05- TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMFF047B05+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMFF048E11+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
rJMFF002K14- TATACAAGTCCGAATGTGAATGCCGATGCACGAACCACCAAGGCTAAGGTGCTGGTTCCA
JMSF039L20+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
rJMFF026F02- TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMFF026F02+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
rJMSF019A05- TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMSF019A05+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
JMFF017M20+ TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
rJMFF017M20- TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
                      ____________________________________________________________
consensus TATACAAGTCCGAATGTGAATGCCGATGCACGAGCCACCAAGGCTAAGGTGCTGGTTCCA
 
. : . : . : . : . : . :
JMFN011H21+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMFN003D24+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMFN028N02+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTT-ACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMFN038I10+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
rJMSF039L20- GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMFN018G01+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
rJMFF048E11- GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
rJMFF047B05- GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMFF047B05+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMFF048E11+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
rJMFF002K14- GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMSF039L20+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
rJMFF026F02- GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMFF026F02+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
rJMSF019A05- GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMSF019A05+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
JMFF017M20+ GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
rJMFF017M20- GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
                      ____________________________________________________________
consensus GAGTAGGGTCCCGGTGGAGGCGCCATTGTTGACTGCAAAGCGAGCAGAAGGAGAACGTGC
 
. : . : . : . : . : . :
JMFN011H21+ TTTTGCTCAG
JMFN003D24+ TTTTGCTCAGATCTC
JMFN028N02+ TTTTGCTCAGATCTCT
JMFN038I10+ TTTTGCTCAGATCTCTCTACAAC
rJMSF039L20- TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAG
JMFN018G01+ TTTTGCTCAGATCTC
rJMFF048E11- TTTTGCTCAGATCTCTCTACAACCCT
rJMFF047B05- TTTTGCTCAGATCTCTCTACAACCCT
JMFF047B05+ TTTTGCTCAGATCTCTCTACAACCCT
JMFF048E11+ TTTTGCTCAGATCTCTCTACAACCCT
rJMFF002K14- TTTTGCTCAGATCTCTCTACAACCCTAGAAAT
JMSF039L20+ TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAG
rJMFF026F02- TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAGAC
JMFF026F02+ TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAGAC
rJMSF019A05- TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAGAC
JMSF019A05+ TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAGAC
JMFF017M20+ TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAGAC
rJMFF017M20- TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAGACTCCTGTTCCAGACAGCGATGA
                      ____________________________________________________________
consensus TTTTGCTCAGATCTCTCTACAACCCTAGAAATCGAAGACTCCTGTTCCAGACAGCGATGA