List of clones in pair P015525.

cloneseq.5'-sequence3'-sequence
lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008H20Sequence565008343 (20)ref|XP_004145906.1|2e-110PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P744008343 (20)ref|XP_009602099.1|4e-123PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis]
JMFF008J03Sequence731008343 (20)ref|XP_009602099.1|1e-111PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis]
JMFF009M24Sequence569008343 (20)ref|XP_004145906.1|2e-105PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P721008343 (20)ref|XP_009602099.1|1e-111PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis]
JMFF011K22Sequence561008343 (20)ref|XP_004145906.1|7e-109PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P154008343 (20)
JMFF025N07Sequence410008343 (20)ref|XP_007136370.1|2e-42hypothetical protein PHAVU_009G039600g [Phaseolus vulgaris] gb|ESW08364.1| hypot
JMFF025O06Sequence568008343 (20)ref|XP_004145906.1|1e-104PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P471008343 (20)emb|CDP04974.1|1e-51unnamed protein product [Coffea canephora]
JMFF045E02Sequence637008343 (20)ref|XP_009602099.1|2e-126PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis]539008343 (20)emb|CDP04974.1|7e-50unnamed protein product [Coffea canephora]
JMFF050G20Sequence598008343 (20)ref|XP_004145906.1|1e-119PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P539008343 (20)emb|CDP04974.1|8e-57unnamed protein product [Coffea canephora]
JMFN041P18Sequence647008343 (20)ref|XP_009602099.1|9e-124PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis]
JMSF018G16Sequence563008343 (20)ref|XP_004145906.1|1e-110PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P789008343 (20)ref|XP_009602099.1|3e-123PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis]
JMSF045D08Sequence308008343 (20)ref|XP_007143489.1|7e-61hypothetical protein PHAVU_007G076200g [Phaseolus vulgaris] gb|ESW15483.1| hypot
JMSF046P18Sequence706008343 (20)ref|XP_009602099.1|3e-91PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis]641008343 (20)ref|XP_009602099.1|7e-87PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis]

Contig 8343 BLAST Hits against nr-aa DB Show

Alignment

Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.

SCORE============================================Contig008343============================================ 906         
   7  --------------------------------------------------------------------->JMFF045E02                                
                                              <----------------------------------------------------------rJMFF045E02  
  60  ----------------------------------------------------------------->JMFF050G20                                    
                                         <---------------------------------------------------------rJMFF050G20  
 117  ------------------------------------------------------------->JMSF018G16                                        
      <--------------------------------------------------------------------------------------rJMSF018G16  
 141       ------------------------------------------------------>JMFF009M24                                          
                <------------------------------------------------------------------------------rJMFF009M24  
 141       ------------------------------------------------------>JMFF025O06                                          
                                             <-------------------------------------------------rJMFF025O06  
 164  ------------------------------------------------------------->JMFF008H20                                        
     <---------------------------------------------------------------------------------rJMFF008H20  
 171  ------------------------------------------------------------->JMFF011K22                                        
                                                                      <----------------rJMFF011K22  
 200  ----------------------------------------------------------------------------->JMSF046P18                        
              <---------------------------------------------------------------------rJMSF046P18

The following clones don't have the opposite end in this pair.

                                               <--------------------------------------------rJMFF025N07-              
                                        --------------------------------->JMSF045D08-                                 
                <--------------------------------------------------------rJMFF008J03-                                 
     ---------------------------------------------------------------------->JMFN041P18-