| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008H20 | Sequence | 565 | 008343 (20) | ref|XP_004145906.1| | 2e-110 | PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P | 744 | 008343 (20) | ref|XP_009602099.1| | 4e-123 | PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] |
| JMFF008J03 | Sequence | 731 | 008343 (20) | ref|XP_009602099.1| | 1e-111 | PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] | |||||
| JMFF009M24 | Sequence | 569 | 008343 (20) | ref|XP_004145906.1| | 2e-105 | PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P | 721 | 008343 (20) | ref|XP_009602099.1| | 1e-111 | PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] |
| JMFF011K22 | Sequence | 561 | 008343 (20) | ref|XP_004145906.1| | 7e-109 | PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P | 154 | 008343 (20) | |||
| JMFF025N07 | Sequence | 410 | 008343 (20) | ref|XP_007136370.1| | 2e-42 | hypothetical protein PHAVU_009G039600g [Phaseolus vulgaris] gb|ESW08364.1| hypot | |||||
| JMFF025O06 | Sequence | 568 | 008343 (20) | ref|XP_004145906.1| | 1e-104 | PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P | 471 | 008343 (20) | emb|CDP04974.1| | 1e-51 | unnamed protein product [Coffea canephora] |
| JMFF045E02 | Sequence | 637 | 008343 (20) | ref|XP_009602099.1| | 2e-126 | PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] | 539 | 008343 (20) | emb|CDP04974.1| | 7e-50 | unnamed protein product [Coffea canephora] |
| JMFF050G20 | Sequence | 598 | 008343 (20) | ref|XP_004145906.1| | 1e-119 | PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P | 539 | 008343 (20) | emb|CDP04974.1| | 8e-57 | unnamed protein product [Coffea canephora] |
| JMFN041P18 | Sequence | 647 | 008343 (20) | ref|XP_009602099.1| | 9e-124 | PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] | |||||
| JMSF018G16 | Sequence | 563 | 008343 (20) | ref|XP_004145906.1| | 1e-110 | PREDICTED: 60S ribosomal protein L9-like [Cucumis sativus] ref|XP_004160355.1| P | 789 | 008343 (20) | ref|XP_009602099.1| | 3e-123 | PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] |
| JMSF045D08 | Sequence | 308 | 008343 (20) | ref|XP_007143489.1| | 7e-61 | hypothetical protein PHAVU_007G076200g [Phaseolus vulgaris] gb|ESW15483.1| hypot | |||||
| JMSF046P18 | Sequence | 706 | 008343 (20) | ref|XP_009602099.1| | 3e-91 | PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] | 641 | 008343 (20) | ref|XP_009602099.1| | 7e-87 | PREDICTED: 60S ribosomal protein L9-1-like [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFN041P18- GGC
JMFF008H20- GGC
rJMFF008H20+ CCGGGC
____________________________________________________________
consensus CCGGGC
. : . : . : . : . : . :
JMFN041P18- TGGCATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
JMFF008H20- TGGCATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
rJMFF008H20+ TGGCATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
JMSF046P18- CATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
JMFF045E02- GGCATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
JMFF050G20- GCATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
JMSF018G16- GGCATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
JMFF011K22- TAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
JMFF009M24- CATGAAGACTATA
JMFF025O06- CATGAAGACTATA
rJMSF018G16+ GGCATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
____________________________________________________________
consensus TGGCATAATTCTCAGCACGAGAGACAGAGAGAGAGTTATCGAGATACCATGAAGACTATA
. : . : . : . : . : . :
JMFN041P18- CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
JMFF008H20- CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
rJMFF008H20+ CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
JMSF046P18- CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
JMFF045E02- CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
rJMSF046P18+ GACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
JMFF050G20- CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
JMSF018G16- CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
JMFF011K22- CTCTCCTCAGATTCCATGGACATCCCTGACAGGGTGAAAATCAAGGTGAAAGCCAAGCAA
rJMFF008J03+ GAAAATCAAGGTGAAAGCCAAGCAA
JMFF009M24- CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
JMFF025O06- CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
rJMSF018G16+ CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
rJMFF009M24+ AAAATCAAGGTGAAAGCCAAGCAA
____________________________________________________________
consensus CTCTCCTCAGATTCCATGGACATCCCTGACGGGGTGAAAATCAAGGTGAAAGCCAAGCAA
. : . : . : . : . : . :
JMFN041P18- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
JMFF008H20- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
rJMFF008H20+ ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
JMSF046P18- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
JMFF045E02- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
rJMSF046P18+ ATTGAGGTGGAAAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
JMFF050G20- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
JMSF018G16- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
JMFF011K22- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
rJMFF008J03+ ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
JMFF009M24- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
JMFF025O06- ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
rJMSF018G16+ ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
rJMFF009M24+ ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
____________________________________________________________
consensus ATTGAGGTGG-AAGGTCCCAGAGGTACACTCACCCGTAACTTCAAGCACCTCAACCTGGA
. : . : . : . : . : . :
JMFN041P18- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
JMFF008H20- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
rJMFF008H20+ TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
JMSF046P18- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGAC-CCTGGTT
JMFF045E02- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
rJMSF046P18+ TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGAC-CCTGGTT
JMFF050G20- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
JMSF018G16- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
JMFF011K22- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
rJMFF008J03+ TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
JMFF009M24- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
JMFF025O06- TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
rJMSF018G16+ TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
rJMFF009M24+ TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
____________________________________________________________
consensus TTTCCAGCTCATTACCGATGAGGCCACCGGAAAACGGAAGCTTAAGGTCGACGCCTGGTT
. : . : . : . : . : . :
JMFN041P18- CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
JMFF008H20- CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
rJMFF008H20+ CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
JMSF046P18- CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
JMFF045E02- CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
rJMSF046P18+ CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
JMFF050G20- CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
JMSF018G16- CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
JMFF011K22- CGGATCACGGAAGACCACTGCTGCTATTCGCGCCGCCCTCAGCCACGTCGACAACCTCAT
rJMFF008J03+ CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
JMFF009M24- CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
JMFF025O06- CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
rJMSF018G16+ CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
rJMFF009M24+ CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
____________________________________________________________
consensus CGGATCACGGAAGACCACTGCTGCTATTCGCACCGCCCTCAGCCACGTCGACAACCTCAT
. : . : . : . : . : . :
JMFN041P18- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMFF008H20- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
rJMFF008H20+ CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMSF046P18- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMFF045E02- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGTTTTGTCTACGCTCACTTTCCCAT
rJMSF046P18+ CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMFF050G20- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMSF018G16- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMFF011K22- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
rJMFF008J03+ CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMFF009M24- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMFF025O06- CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
JMSF045D08- AGGGCTTCCGCTACAAGATGGGCTTTGTCTACGCTCACTTTCCCAT
rJMSF018G16+ CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
rJMFF009M24+ CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
rJMFF025O06+ CCCAT
rJMFF050G20+ ACAAGATGCGCTTGGTCTACGCTCACTTTCCCAT
____________________________________________________________
consensus CACCGGCGTTACCAAGGGCTTCCGCTACAAGATGCGCTTTGTCTACGCTCACTTTCCCAT
. : . : . : . : . : . :
JMFN041P18- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMFF008H20- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
rJMFF008H20+ CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMSF046P18- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMFF045E02- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
rJMSF046P18+ CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMFF050G20- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMSF018G16- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMFF011K22- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
rJMFF008J03+ CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMFF009M24- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMFF025O06- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
rJMFF025N07+ ACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
JMSF045D08- CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
rJMSF018G16+ CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
rJMFF009M24+ CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
rJMFF025O06+ CAATGCNTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTNGGAGAGAA
rJMFF050G20+ CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
rJMFF045E02+ AATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
____________________________________________________________
consensus CAATGCCTCCATCACTAACACTAATAAGTCCATTGAGATCCGAAATTTCCTTGGAGAGAA
. : . : . : . : . : . :
JMFN041P18- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
JMFF008H20- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMFF008H20+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
JMSF046P18- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
JMFF045E02- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMSF046P18+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
JMFF050G20- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
JMSF018G16- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
JMFF011K22- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMFF008J03+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
JMFF009M24- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
JMFF025O06- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMFF025N07+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTNCGCTCTGAAAAAGTGAA
JMSF045D08- GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMSF018G16+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMFF009M24+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMFF025O06+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMFF050G20+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
rJMFF045E02+ GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
____________________________________________________________
consensus GAAGGTCAGGAAAGTGGACATGCTTGAAGGGGTTTCTGTTGTCCGCTCTGAAAAAGTGAA
. : . : . : . : . : . :
JMFN041P18- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMFF008H20- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMFF008H20+ GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMSF046P18- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMFF045E02- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMSF046P18+ GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMFF050G20- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMSF018G16- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMFF011K22- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMFF008J03+ GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMFF009M24- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMFF025O06- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMFF025N07+ GGATGAANTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
JMSF045D08- GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMSF018G16+ GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMFF009M24+ GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMFF025O06+ GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMFF050G20+ GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
rJMFF045E02+ GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
____________________________________________________________
consensus GGATGAATTGGTATTGGACGGGAATGATATTGAGCTTGTGTCTCGCTCATGCGCACTTAT
. : . : . : . : . : . :
JMFN041P18- TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
JMFF008H20- TAACCAGAAATGCCATGTCAAGA
rJMFF008H20+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
JMSF046P18- TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
JMFF045E02- TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
rJMSF046P18+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
JMFF050G20- TAACCAGAAATGCCATGTCAAGAAACAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
JMSF018G16- TAACCAGAAATGCCATGTCAAGAA
JMFF011K22- TAACCAGAAATGCCATGTCAAGA
rJMFF008J03+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
JMFF009M24- TAACCAG
JMFF025O06- TAACCA
rJMFF025N07+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCNGAAAGTTCCTCGATGGTATCTATGT
JMSF045D08- TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
rJMFF011K22+ GATGGTATGTATGT
rJMSF018G16+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
rJMFF009M24+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
rJMFF025O06+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
rJMFF050G20+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
rJMFF045E02+ TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATTTATGT
____________________________________________________________
consensus TAACCAGAAATGCCATGTCAAGAACAAGGATATCCGAAAGTTCCTCGATGGTATCTATGT
. : . : . : . : . : . :
JMFN041P18- GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAACCCCC
rJMFF008H20+ GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
JMSF046P18- GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
JMFF045E02- GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATTAACCCC
rJMSF046P18+ GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
JMFF050G20- G
rJMFF008J03+ GAGTGAGAA
rJMFF025N07+ GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTNTAGTTTATC
JMSF045D08- GAGTGAGAAAGGCAAAATTGAG
rJMFF011K22+ GAGNGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
rJMSF018G16+ GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
rJMFF009M24+ GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
rJMFF025O06+ GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
rJMFF050G20+ GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
rJMFF045E02+ GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATTAACCCCCATATAGCCTTCTAGTTTATC
____________________________________________________________
consensus GAGTGAGAAAGGCAAAATTGAGGAGGAAGAATAAACCCCCATATAGCCTTCTAGTTTATC
. : . : . : . : . : . :
rJMFF008H20+ TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTATTTGTAGACTTGC
JMSF046P18- TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTAT
rJMSF046P18+ TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTATT
rJMFF025N07+ TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTNTATTTGTAGACNTGC
rJMFF011K22+ TGTCACCTTTTTATCTTGAGTATTTGCTCCCTAATTTTGATTGTCTATTTGTAGACTTGC
rJMSF018G16+ TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTATTTGTAGACTTGC
rJMFF009M24+ TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTATTTGTAGACTTGC
rJMFF025O06+ TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTATTTGTAGACTTGC
rJMFF050G20+ TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTATTTGTAGACTTGC
rJMFF045E02+ TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTATTTGTAGACTTGC
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consensus TGTCACCTTTTTATCTTGAGTATTTGCTCCTTAATTTTGATTGTCTATTTGTAGACTTGC
. : . : . : . : . : . :
rJMFF008H20+ TATGGAGTTAAATTCAAAG
rJMFF025N07+ TATGGAGNTNAATTCAAAGATTTTTTTGTTTTGTTTTGAGGACATGGNCTCACTAGTAGT
rJMFF011K22+ TATGGAGTTAAATNCAAAGA
rJMSF018G16+ TATGGAGTTAAATTCAAAGATTTTTTTGTTTTGTTTTGAGGACATGGACTCACTAGTAGT
rJMFF009M24+ TATGGAGTTAAATTCAAAGATTTTTTTGTTTTGTTTTGAGGACATGGACTCACTAGTAGT
rJMFF025O06+ TATGGAGTTAAATTCAAAGATTTTTTTGTTTTGTTTTGAGGACATGGACTCACTAGTAGT
rJMFF050G20+ TATGGAGTTAAATTCAAAGATTTTTTTGTTTTGTTTTGAGGACATGGACTCACTAGTAGT
rJMFF045E02+ TATGGAGTTAAATTCAAAGATTTTTTTGTTTTGTTTTGAGGACATGGACTCACTAGTAGT
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consensus TATGGAGTTAAATTCAAAGATTTTTTTGTTTTGTTTTGAGGACATGGACTCACTAGTAGT
. : . : . : . : . : . :
rJMFF025N07+ ACTATCA
rJMSF018G16+ ACTATCATCT
rJMFF009M24+ ACTATCATCTTATCTATGATATTTTAAAGCAT
rJMFF025O06+ ACTATCATCTTATCTATGATATTTTAAAGCAT
rJMFF050G20+ ACTATCATCTTATCTATGATATTTTAAAGCATTCATTCAAAGTTTTAATGATAATTTGGG
rJMFF045E02+ ACTATCATCTTATCTATGATATTTTAAAGCATTCATTCAAAGTTTTAATGATAATTTGGG
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consensus ACTATCATCTTATCTATGATATTTTAAAGCATTCATTCAAAGTTTTAATGATAATTTGGG
. : . : . : . : . : . :
rJMFF050G20+ CATTTTTT
rJMFF045E02+ CATTTTTTXXXXXXXXXXXXXXXXXXXXXXXXGAAAAAAAAAAAAAAAACTCTCCAGGGT
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consensus CATTTTTTNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAAAAAAAAAAAACTCTCCAGGGT