clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008D08 | Sequence | 539 | 001583 (6) | ref|XP_011096679.1| | 4e-80 | PREDICTED: 50S ribosomal protein L20, chloroplastic [Sesamum indicum] | 520 | 001583 (6) | ref|XP_011096679.1| | 3e-80 | PREDICTED: 50S ribosomal protein L20, chloroplastic [Sesamum indicum] |
JMFF013F20 | Sequence | 539 | 001583 (6) | ref|XP_011096679.1| | 4e-80 | PREDICTED: 50S ribosomal protein L20, chloroplastic [Sesamum indicum] | 521 | 001583 (6) | ref|XP_011096679.1| | 3e-80 | PREDICTED: 50S ribosomal protein L20, chloroplastic [Sesamum indicum] |
JMFN007D10 | Sequence | 502 | 001583 (6) | ref|XP_011096679.1| | 3e-79 | PREDICTED: 50S ribosomal protein L20, chloroplastic [Sesamum indicum] | |||||
JMFN036B11 | Sequence | 489 | 001583 (6) | ref|XP_011096679.1| | 1e-72 | PREDICTED: 50S ribosomal protein L20, chloroplastic [Sesamum indicum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001583============================================ 539 28 --------------------------------------------------------------------------------------------------->JMFF008D08 <----------------------------------------------------------------------------------------------rJMFF008D08 28 --------------------------------------------------------------------------------------------------->JMFF013F20 <----------------------------------------------------------------------------------------------rJMFF013F20
The following clones don't have the opposite end in this pair.
<------------------------------------------------------------------------------------------JMFN036B11- -------------------------------------------------------------------------------------------->JMFN007D10-