clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF008H19 | Sequence | 598 | 008158 (10) | ref|XP_011076587.1| | 9e-68 | PREDICTED: transcription factor RF2b-like [Sesamum indicum] | 699 | 008158 (10) | ref|XP_006357296.1| | 1e-51 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] |
JMFF008J17 | Sequence | 610 | 008158 (10) | ref|XP_011076587.1| | 6e-71 | PREDICTED: transcription factor RF2b-like [Sesamum indicum] | 708 | 008158 (10) | ref|XP_006357296.1| | 1e-41 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] |
JMSF003J16 | Sequence | 296 | 008158 (10) | ref|XP_006357296.1| | 3e-16 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] | 734 | 008158 (10) | ref|XP_006357296.1| | 5e-70 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] |
JMSF041F01 | Sequence | 752 | 008158 (10) | ref|XP_010322129.1| | 3e-26 | PREDICTED: transcription factor RF2b-like isoform X1 [Solanum lycopersicum] | 740 | 008158 (10) | dbj|BAC20362.1| | 1e-07 | phosphoenolpyruvate carboxylase kinase [Lotus japonicus] dbj|BAC20363.1| phospho |
JMSF052I08 | Sequence | 639 | 008158 (10) | ref|XP_011076587.1| | 4e-70 | PREDICTED: transcription factor RF2b-like [Sesamum indicum] | 891 | 008158 (10) | ref|XP_006357296.1| | 2e-105 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008158============================================1948 588 ------------>JMSF003J16 <------------------------------------rJMSF003J16 610 ------------------------------>JMFF008H19 <-----------------------------------rJMFF008H19 621 -------------------------------->JMSF052I08 <---------------------------------------------rJMSF052I08 637 ------------------------------>JMFF008J17 <-----------------------------------rJMFF008J17 1074 <---------------------------JMSF041F01 ------------------------------------->rJMSF041F01
The following clones don't have the opposite end in this pair.