| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008H19 | Sequence | 598 | 008158 (10) | ref|XP_011076587.1| | 9e-68 | PREDICTED: transcription factor RF2b-like [Sesamum indicum] | 699 | 008158 (10) | ref|XP_006357296.1| | 1e-51 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] |
| JMFF008J17 | Sequence | 610 | 008158 (10) | ref|XP_011076587.1| | 6e-71 | PREDICTED: transcription factor RF2b-like [Sesamum indicum] | 708 | 008158 (10) | ref|XP_006357296.1| | 1e-41 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] |
| JMSF003J16 | Sequence | 296 | 008158 (10) | ref|XP_006357296.1| | 3e-16 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] | 734 | 008158 (10) | ref|XP_006357296.1| | 5e-70 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] |
| JMSF041F01 | Sequence | 752 | 008158 (10) | ref|XP_010322129.1| | 3e-26 | PREDICTED: transcription factor RF2b-like isoform X1 [Solanum lycopersicum] | 740 | 008158 (10) | dbj|BAC20362.1| | 1e-07 | phosphoenolpyruvate carboxylase kinase [Lotus japonicus] dbj|BAC20363.1| phospho |
| JMSF052I08 | Sequence | 639 | 008158 (10) | ref|XP_011076587.1| | 4e-70 | PREDICTED: transcription factor RF2b-like [Sesamum indicum] | 891 | 008158 (10) | ref|XP_006357296.1| | 2e-105 | PREDICTED: transcription factor RF2b-like [Solanum tuberosum] |
This contig is upended
. : . : . : . : . : . :
rJMSF041F01- ATCATCCTTATACAACTACAACATATAT
____________________________________________________________
consensus ATCATCCTTATACAACTACAACATATAT
. : . : . : . : . : . :
rJMSF041F01- AATATACAAATGTAACGGAAGACATAATGTAGTCATAAATCTCCAACCGTTACATAATCA
____________________________________________________________
consensus AATATACAAATGTAACGGAAGACATAATGTAGTCATAAATCTCCAACCGTTACATAATCA
. : . : . : . : . : . :
rJMSF041F01- ATACTAATAATGGTCACACTTAATATATTATTTACAACAATTTCCTATATTATTTAATTG
____________________________________________________________
consensus ATACTAATAATGGTCACACTTAATATATTATTTACAACAATTTCCTATATTATTTAATTG
. : . : . : . : . : . :
rJMSF041F01- ATTAACCCATTTCAATTTGAGAACCACTCATATGCAGATCATCTTTCTCAGCAGAGCCTT
____________________________________________________________
consensus ATTAACCCATTTCAATTTGAGAACCACTCATATGCAGATCATCTTTCTCAGCAGAGCCTT
. : . : . : . : . : . :
rJMSF041F01- TGCTTCCGGCGAAACTGATCTTCTCATTGTACTCCCGACGCATCAATACCTTCGGCGCCG
____________________________________________________________
consensus TGCTTCCGGCGAAACTGATCTTCTCATTGTACTCCCGACGCATCAATACCTTCGGCGCCG
. : . : . : . : . : . :
rJMSF041F01- CGTAGTACGGCGTCTCGACCACCGCCGGCATCCGGTCGTCGTCGCACCCTCCGAACCACT
____________________________________________________________
consensus CGTAGTACGGCGTCTCGACCACCGCCGGCATCCGGTCGTCGTCGCACCCTCCGAACCACT
. : . : . : . : . : . :
rJMSF041F01- CCGTCGATCCTCAAAAGATTTGAGATTTGGTCGAACCTCAAAGTCCACGAGACTCCCACC
JMSF041F01+ CTCAAAAGATTTGAGATTTGGTCGAACCTCAAAGTCCACGAGACTCCCACC
____________________________________________________________
consensus CCGTCGATCCTCAAAAGATTTGAGATTTGGTCGAACCTCAAAGTCCACGAGACTCCCACC
. : . : . : . : . : . :
rJMSF041F01- GGGCATCCGGTCGAAACCTTTTCTGGTCAATGGTCACAAGAGTCAAACCCACCGCTAAAT
JMSF041F01+ GGGCATCCGGTCGAAACCTTTTCTGGTCAATGGTCACAAGAGTCAAACCCACCGCTAAAT
____________________________________________________________
consensus GGGCATCCGGTCGAAACCTTTTCTGGTCAATGGTCACAAGAGTCAAACCCACCGCTAAAT
. : . : . : . : . : . :
rJMSF041F01- TGAAACAGTGAACAATTACCACTACACTCAACTGTACTTCCGCCATTATTGGTTGCTACA
JMSF041F01+ TGAAACAGTGAACAATTACCACTACACTCAACTGTACTTCCGCCATTATTGGTTGCTACA
____________________________________________________________
consensus TGAAACAGTGAACAATTACCACTACACTCAACTGTACTTCCGCCATTATTGGTTGCTACA
. : . : . : . : . : . :
rJMSF041F01- TACGCTTTCCTGTTTCTTTCTTTGCATCACCTCAAAAGCTTCGTCCTTTTTATCTTTTGA
JMSF003J16- CACCTCAAAAGCTTCGTCCTTTTTGTCCTCTGA
JMSF041F01+ TACGCTTTCCTGTTTCTTTCTTTGCATCACCTCAAAAGCTTCGTCCTTTTTATCTTTTGA
____________________________________________________________
consensus TACGCTTTCCTGTTTCTTTCTTTGCATCACCTCAAAAGCTTCGTCCTTTTTATCTTTTGA
. : . : . : . : . : . :
rJMSF041F01- ATCTCCCCCAACAAAAGGGTTGTTTTGTTTGTTTGTTTTCTTGCATTTTCCACTCCCATC
JMSF003J16- ATCTTCCCCAACAAAAGGGTTGTTTTGTTTGTTTGTTTTCTTGCATTTTTCACTCCCATC
JMSF041F01+ ATCTCCCCCAACAAAAGGGTTGTTTTGTTTGTTTGTTTTCTTGCATTTTCCACTCCCATC
JMSF052I08- AGGGTTGTTTTGTTTGTTTGTTTTCTTGCATTTTTCACTCCCATC
JMFF008H19- GCATTTTTCACTCCCATC
JMFF008J17- GCATTTTTCACTCCCATC
____________________________________________________________
consensus ATCTCCCCCAACAAAAGGGTTGTTTTGTTTGTTTGTTTTCTTGCATTTTTCACTCCCATC
. : . : . : . : . : . :
rJMSF041F01- AAGATGCAAGATCCATCAGGTTCGAAGCCATTGGCCAACCAAACGCCGCCGTTTCCCTCT
JMSF003J16- AAGATGCAAGATCCATCAGGTTCGAAGCCATCGGCCAACCAAACGCCGCCGTTTCCCTCT
JMSF041F01+ AAGATGCAAGATCCATCAGGTTCGAAGCCATTGGCCAACCAAACGCCGCCGTTTCCCTCT
JMSF052I08- AAGATGCAAGATCCATCAGGTTCGAAGCCATCGGCCAACCAAACGCCGCCGTTTCCCTCT
JMFF008H19- AAGATGCAAGATCCATCAGGTTCGAAGCCATCGGCCAACCAAACGCCGCCGTTTCCCTCT
JMFF008J17- AAGATGCAAGATCCATCAGGTTCGAAGCCATCGGCCAACCAAACGCCGCCGTTTCCCTCT
____________________________________________________________
consensus AAGATGCAAGATCCATCAGGTTCGAAGCCATCGGCCAACCAAACGCCGCCGTTTCCCTCT
. : . : . : . : . : . :
rJMSF041F01- GCATTCCAACAATCGCACCACCGGAGGGCTCACTCTGAAGTCAACTTTCGTC
JMSF003J16- GCATTCCGGCAATCGCACCACCGGAGGGCTCACTCCGAAGTCAACTTCCGTCTGCCGGAG
JMSF041F01+ GCATTCCAACAATCGCACCACCGGAGGGCTCACTCTGAAGTCAACTTTCGTCTGCCGAAG
JMSF052I08- GCATTCCGGCAATCGCACCACCGGAGGGCTCACTCCGAAGTCAACTTCCGTCTGCCGGAG
JMFF008H19- GCATTCCGGCAATCGCACCACCGGAGGGCTCACTCCGAAGTCAACTTCCGTCTGCCGGAG
JMFF008J17- GCATTCCGGCAATCGCACCACCGGAGGGCTCACTCCGAAGTCAACTTCCGTCTGCCGGAG
____________________________________________________________
consensus GCATTCCGGCAATCGCACCACCGGAGGGCTCACTCCGAAGTCAACTTCCGTCTGCCGGAG
. : . : . : . : . : . :
JMSF003J16- GATCTGGATCTGGCGTCCGACCCCTTCGACGCCGCCGCGCCGGCCGGGA
JMSF041F01+ GATCTGGATCTGGAGTCCGACCCCTTCGACACTGCCGTGCCGGCCAGGAGCTTCGAGGAG
JMSF052I08- GATCTGGATCTGGCGTCCGACCCCTTCGACGCCGCCGCGCCGGCCGGGAGCTTCGAGGAG
JMFF008H19- GACCTGGATCTGGCGTCCGACCCCTTCGACGCCGCCGCGCCGGCCGGGAGCTTCGAGGAG
JMFF008J17- GACCTGGATCTGGCGTCCGACCCCTTCGACGCCGCCGCGCCGGCCGGGAGCTTCGAGGAG
____________________________________________________________
consensus GATCTGGATCTGGCGTCCGACCCCTTCGACGCCGCCGCGCCGGCCGGGAGCTTCGAGGAG
. : . : . : . : . : . :
JMSF041F01+ ATGGGATCCGAGGACGATTTATTCTCTACTTACATGGACATCGAGAAGCTCGGTGCCAGA
JMSF052I08- ATGGGATCCGAGGACGATTTCTTCTCTACTTACATGGACATCGAGAAGCTCGGCGCCGGA
JMFF008H19- ATGGGATCCGAGGACGATTTCTTCTCTACTTACATGGACATCGAGAAGCTCGGCGCCGGA
JMFF008J17- ATGGGATCCGAGGACGATTTCTTCTCTACTTACATGGACATCGAGAAGCTCGGCGCCGGA
____________________________________________________________
consensus ATGGGATCCGAGGACGATTTCTTCTCTACTTACATGGACATCGAGAAGCTCGGCGCCGGA
. : . : . : . : . : . :
JMSF041F01+ TCCGGCG
JMSF052I08- TCCGGCGCCGCCGATGCTTCTGCGGCGGCGGGTGTTGACAATGCAGGCTGCGATGGCGGT
JMFF008H19- TCCGGCGCCGCCGATGCTTCTGCGGCGGCGGGTGTTGACAATGCAGGCTGCGATGGCGGT
JMFF008J17- TCCGGCGCCGCCGATGCTTCTGCGGCGGCGGGTGTTGACAATGCAGGCTGCGATGGCGGT
____________________________________________________________
consensus TCCGGCGCCGCCGATGCTTCTGCGGCGGCGGGTGTTGACAATGCAGGCTGCGATGGCGGT
. : . : . : . : . : . :
JMSF052I08- AATGGGGTGAAGAGCTCCAGCCGGCCGCGGCATCGCCATAGCAACTCGGTGGATAGCTCC
JMFF008H19- AATGGGGTGAAGAGCTCCAGCCGGCCGCGGCATCGCCATAGCAACTCGGTGGATAGCTCC
JMFF008J17- AATGGGGTGAAGAGCTCCAGCCGGCCGCGGCATCGCCATAGCAACTCGGTGGATAGCTCC
____________________________________________________________
consensus AATGGGGTGAAGAGCTCCAGCCGGCCGCGGCATCGCCATAGCAACTCGGTGGATAGCTCC
. : . : . : . : . : . :
JMSF052I08- GGCTTACTGCTTGGCGATGGCGGCATTGAAGCTAAGAAATCTATGGCGCCTGATAAACTG
JMFF008H19- GGCTTACTGCTTGGCGATGGCGGCATTGAAGCTAAGAAATCTATGGCGCCTGATAAACTG
JMFF008J17- GGCTTACTGCTTGGCGATGGCGGCATTGAAGCTAAGAAATCTATGGCGCCTGATAAACTG
rJMSF052I08+ CTAAGAAATCTATGGCGCCTGATAAACTG
____________________________________________________________
consensus GGCTTACTGCTTGGCGATGGCGGCATTGAAGCTAAGAAATCTATGGCGCCTGATAAACTG
. : . : . : . : . : . :
JMSF052I08- GCTGAGCTCTGGACCATTGATCCCAAAAGGGCAAAAAGAATTCTGGCAAATAGGCAATCT
JMFF008H19- GCTGAGCTCTGGACCATTGATCCCAAAAGGGCAAAAAGAATTCTGGCAAATAGGCAATCT
JMFF008J17- GCTGAGCTCTGGACCATTGATCCCAAAAGGGCAAAAAGAATTCTGGCAAATAGGCAATCT
rJMSF052I08+ GCTGAGCTCTGGACCATTGATCCCAAAAGGGCAAAAAGAATTCTGGCAAATAGGCAATCT
____________________________________________________________
consensus GCTGAGCTCTGGACCATTGATCCCAAAAGGGCAAAAAGAATTCTGGCAAATAGGCAATCT
. : . : . : . : . : . :
JMSF052I08- GCTGCTCGATCGAAAGAGCGCAAGGCGCATTACATGTCTGAGCTTGAGAGGAAAGTTCAG
JMFF008H19- GCTGCTCGATCGAAAGAGCGCAAGGCGCATTACATGTCTGAGCTTGAGAGGAAAGTTCAG
JMFF008J17- GCTGCTCGATCGAAAGAGCGCAAGGCGCATTACATGTCTGAGCTTGAGAGGAAAGTTCAG
rJMSF052I08+ GCTGCTCGATCGAAAGAGCGCAAGGCGCATTACATGTCTGAGCTTGAGAGGAAAGTTCAG
____________________________________________________________
consensus GCTGCTCGATCGAAAGAGCGCAAGGCGCATTACATGTCTGAGCTTGAGAGGAAAGTTCAG
. : . : . : . : . : . :
JMSF052I08- ACCCTTCAAACAGAAGCAACCACTCTTTCTGCACAGCTCACCCTATTCCA
JMFF008H19- ACCCTTCAAACAGAAGCAACCACTCTTTCTGCACAGCTCA
JMFF008J17- ACCCTTCAAACAGAAGCAACCACTCTTTCTGCACAGCTCACCCTATTCCAGA
rJMSF003J16+ ACCCTTCAAACAGAAGCAACCACTCTTTCTGCACAGCTCACCCTATTCCAGAGGGATACG
rJMSF052I08+ ACCCTTCAAACAGAAGCAACCACTCTTTCTGCACAGCTCACCCTATTCCAGAGGGATACG
rJMFF008J17+ TTCCAGAGGGATACG
____________________________________________________________
consensus ACCCTTCAAACAGAAGCAACCACTCTTTCTGCACAGCTCACCCTATTCCAGAGGGATACG
. : . : . : . : . : . :
rJMSF003J16+ ACTGGTCTTACTAATGAGAACACTGAGCTTAAGCTCCGTTTGCAAGCCATGGAACAACAG
rJMSF052I08+ ACTGGTCTTACTAATGAGAACACTGAGCTTAAGCTCCGTTTGCAAGCCATGGAACAACAG
rJMFF008J17+ ACTGGTCTTACTAATGAGAACACTGAGCTTAAGCTCNGTTTGCAAGCCAGGGAACAACAG
rJMFF008H19+ ACTGAGCTTAAGCTCCGTTTGCAAGCCATGGAACANCAG
____________________________________________________________
consensus ACTGGTCTTACTAATGAGAACACTGAGCTTAAGCTCCGTTTGCAAGCCATGGAACAACAG
. : . : . : . : . : . :
rJMSF003J16+ GCTCAATTACGTGATGCTTTAAACGAAGCACTGAAGCAGGAGGTTGAGAGGCTCAGAATA
rJMSF052I08+ GCTCAATTACGTGATGCTTTAAACGAAGCACTGAAGCAGGAGGTTGAGAGGCTCAGAATA
rJMFF008J17+ GCTCAATTACGTGATGCTTTAAACGAAGCACTGAAGCAGGAGGTTGAGAGGCTCAGAATA
rJMFF008H19+ GCTCAATTACGTGATGCTTTAAACGAAGCACTGAAGCAGGAGGTTGAGAGGCTCAGAATA
____________________________________________________________
consensus GCTCAATTACGTGATGCTTTAAACGAAGCACTGAAGCAGGAGGTTGAGAGGCTCAGAATA
. : . : . : . : . : . :
rJMSF003J16+ GCGACTGGTGAAATGGCAGCCCCGTCTGATGCATACAATTTTGGAATGCAACATATTCCT
rJMSF052I08+ GCGACTGGTGAAATGGCAGCCCCGTCTGATGCATACAATTTTGGAATGCAACATATTCCT
rJMFF008J17+ GCGACTGGTGAAATGGCAGCCCCGTCTGATGCATACAATTTTGGAATGCAACATATTCCT
rJMFF008H19+ GCGACTGGTGAAATGGCAGCCCCGTCTGATGCATACAATTTTGGAATGCAACATATTCCT
____________________________________________________________
consensus GCGACTGGTGAAATGGCAGCCCCGTCTGATGCATACAATTTTGGAATGCAACATATTCCT
. : . : . : . : . : . :
rJMSF003J16+ TATAACCAATCAACCTTATTTTCTTCGCATCAACCACAATTAGGCCCGAGCGACTCCCAG
rJMSF052I08+ TATAACCAATCAACCTTATTTTCTTCGCATCAACCACAATTAGGCCCGAGCGACTCCCAG
rJMFF008J17+ TATAACCAATCAACCTTATTTTCTTCGCATCAACCACAATTAGGCCCGAGCGACTCCCAG
rJMFF008H19+ TATAACCAATCAACCTTATTTTCTTCGCATCAACCACAATTAGGCCCGAGCGACTCCCAG
____________________________________________________________
consensus TATAACCAATCAACCTTATTTTCTTCGCATCAACCACAATTAGGCCCGAGCGACTCCCAG
. : . : . : . : . : . :
rJMSF003J16+ AATATGCAAATGCCACAGTATCATCCTCTCGGGTCCAACATATCTACGCCCCATCACCCC
rJMSF052I08+ AATATGCAAATGCCACAGTATCATCCTCTCGGGTCCAACATATCTACGCCCCATCACCCC
rJMFF008J17+ AATATGCAAATGCCACAGTATCATCCTCTCGGGTCCAACATATCTACGCCCCATCACCCC
rJMFF008H19+ AATATGCAAATGCCACAGTATCATCCTCTCGGGTCCAACATATCTACGCCCCATCACCCC
____________________________________________________________
consensus AATATGCAAATGCCACAGTATCATCCTCTCGGGTCCAACATATCTACGCCCCATCACCCC
. : . : . : . : . : . :
rJMSF003J16+ ATTCTTGCAGGAAACCACGCACAGGCTCTCCTGCATACACTGAACCAGGATCCTCTCGGG
rJMSF052I08+ ATTCTTGCAGGAAACCACGCACAGGCTCTCCTGCATACACTGAACCAGGATCCTCTCGGG
rJMFF008J17+ ATTCTTGCAGGAAACCACGCACAGGCTCTCCTGCATACACTGAACCAGGATCCTCTCGGG
rJMFF008H19+ ATTCTTGCAGGAAACCACGCACAGGCTCTCCTGCATACACTGAACCAGGATCCTCTCGGG
____________________________________________________________
consensus ATTCTTGCAGGAAACCACGCACAGGCTCTCCTGCATACACTGAACCAGGATCCTCTCGGG
. : . : . : . : . : . :
rJMSF003J16+ CGCTTCCAGGGTCTTGATATCAATAGCAGCGGGTCCCATTTCATCAAGACCGAAGTTCCT
rJMSF052I08+ CGCTTCCAGGGTCTTGATATCAATAGCAGCGGGTCCCATTTCATCAAGACCGAAGTTCCT
rJMFF008J17+ CGCTTCCAGGGTCTTGATATCAATAGCAGCGGGTCCCATTTCATCAAGACCGAAGTTCCT
rJMFF008H19+ CGCTTCCAGGGTCTTGATATCAATAGCAGCGGGTCCCATTTCATCAAGACCGAAGTTCCT
____________________________________________________________
consensus CGCTTCCAGGGTCTTGATATCAATAGCAGCGGGTCCCATTTCATCAAGACCGAAGTTCCT
. : . : . : . : . : . :
rJMSF003J16+ ACCATATCTGCCAGCGAAAGCAGCAGTACATTCTGATCGCAAGCTCTCCCTATTTATTGA
rJMSF052I08+ ACCATATCTGCCAGCGAAAGCAGCAGTACATTCTGATCGCAAGCTCTCCCTATTTATTGA
rJMFF008J17+ ACCATATCTGCCAGCGAAAGCAGCAGTACATTCTGATCGCAAGCTCTCCCTATTTATTGA
rJMFF008H19+ ACCATATCTGCCAGCGAAAGCAGCAGTACATTCTGATCGCAAGCTCTCCCTATTTATTGA
____________________________________________________________
consensus ACCATATCTGCCAGCGAAAGCAGCAGTACATTCTGATCGCAAGCTCTCCCTATTTATTGA
. : . : . : . : . : . :
rJMSF003J16+ ATTGTTCATAGACTGACACCATGTTTAACATCCCGGGAACTCACTGTTCTTCGATTATTT
rJMSF052I08+ ATTGTTCATAGACTGACACCATGTTTAACATCCCGGGAACTCACTGTTCTTCGATTATTT
rJMFF008J17+ ATTGTTCATAGACTGACACCATGTTTAACATCCCGGGAACTCACTGTTCTTCGATTATTT
rJMFF008H19+ ATTGTTCATAGACTGACACCATGTTTAACATCCCGGGAACTCACTGTTCTTCGATTATTT
____________________________________________________________
consensus ATTGTTCATAGACTGACACCATGTTTAACATCCCGGGAACTCACTGTTCTTCGATTATTT
. : . : . : . : . : . :
rJMSF003J16+ TTAGATTCTTACCTTCGACTTAGTAGTAGCAGTATGTTATATTCTTTGATGTTGTTGTGG
rJMSF052I08+ TTAGATTCTTACCTTCGACTTAGTAGTAGCAGTATGTTATATTCTTTGATGTTGTTGTGG
rJMFF008J17+ TTAGATTCTTACCTTCGACTTAGTAGTAGCAGTATGTTATATTCTTTGATGTTGTTGTGG
rJMFF008H19+ TTAGATTCTTACCTTCGACTTAGTAGTAGCAGTATGTTATATTCTTTGATGTTGTTGTGG
____________________________________________________________
consensus TTAGATTCTTACCTTCGACTTAGTAGTAGCAGTATGTTATATTCTTTGATGTTGTTGTGG
. : . : . : . : . : . :
rJMSF003J16+ CAGTGGGTTTCTTTGATCTTTCTTTTGTTTCTTCTTTGTATCAATCATGTAATACTCAAC
rJMSF052I08+ CAGTGGGTTTCTTTGATCTTTCTTTTGTTTCTTCTTTGTATCAATCATGTAATACTCAAC
rJMFF008J17+ CAGTGGGTTTCTTTGATCTTTCTTTTGTTTCTTCTTTGTATCAATCATGTAATACTCAAC
rJMFF008H19+ CAGTGGGTTTCTTTGATCTTTCTTTTGTTTCTTCTTTGTATCAATCATGTAATACTCAAC
____________________________________________________________
consensus CAGTGGGTTTCTTTGATCTTTCTTTTGTTTCTTCTTTGTATCAATCATGTAATACTCAAC
. : . : . : . : . : . :
rJMSF003J16+ TCATTGT
rJMSF052I08+ TCATTGTTGAACTCTCATGCAT
rJMFF008J17+ TCATTGTTGAACTCTCATGCATTGTATCATGTG
rJMFF008H19+ TCATTGTTGAACTCTCATGCATTGTATCATGTGGAAGCCTTGACTATTGTGCTGATTAAT
____________________________________________________________
consensus TCATTGTTGAACTCTCATGCATTGTATCATGTGGAAGCCTTGACTATTGTGCTGATTAAT