clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN013O04 | Sequence | 542 | 005191 (7) | ref|XP_007039159.1| | 1e-85 | Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao] gb|EOY23660.1| Ubi | |||||
JMFN018A22 | Sequence | 615 | 005191 (7) | ref|XP_010271616.1| | 3e-85 | PREDICTED: ubiquitin-60S ribosomal protein L40-like [Nelumbo nucifera] | |||||
JMFN033O16 | Sequence | 597 | 005191 (7) | ref|XP_010271616.1| | 2e-85 | PREDICTED: ubiquitin-60S ribosomal protein L40-like [Nelumbo nucifera] | |||||
JMSF031K07 | Sequence | 631 | 005191 (7) | ref|XP_007039159.1| | 2e-85 | Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao] gb|EOY23660.1| Ubi | 611 | 005191 (7) | ref|XP_007039159.1| | 1e-85 | Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao] gb|EOY23660.1| Ubi |
JMSF034H04 | Sequence | 615 | 005191 (7) | ref|XP_007039159.1| | 1e-85 | Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao] gb|EOY23660.1| Ubi | 572 | 005191 (7) | ref|XP_007039159.1| | 8e-86 | Ubiquitin supergroup,Ribosomal protein L40e [Theobroma cacao] gb|EOY23660.1| Ubi |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005191============================================ 615 4 ----------------------------------------------------------------------->JMSF031K07 <--------------------------------------------------------------------------------------------------rJMSF031K07 57 --------------------------------------------------------------------------------------------------->JMSF034H04 <------------------------------------------------------------------------------------------rJMSF034H04
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------->JMFN018A22- <----------------------------------------------------------------------------------JMFN013O04- ------------------------------------------------------------------------------------------------>JMFN033O16-