clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001A06 | Sequence | 572 | 005872 (8) | emb|CDO99748.1| | 2e-33 | unnamed protein product [Coffea canephora] | 774 | 005872 (8) | ref|XP_009760862.1| | 2e-46 | PREDICTED: GATA transcription factor 8-like [Nicotiana sylvestris] ref|XP_009760 |
JMFF010M17 | Sequence | 575 | 005872 (8) | ref|XP_009628969.1| | 3e-53 | PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 8-like [Nicotiana tom | 766 | 005872 (8) | ref|XP_010683872.1| | 2e-41 | PREDICTED: GATA transcription factor 8 [Beta vulgaris subsp. vulgaris] |
JMFF011K10 | Sequence | 571 | 005872 (8) | ref|XP_009628969.1| | 2e-48 | PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 8-like [Nicotiana tom | 693 | 005872 (8) | ref|XP_010683872.1| | 1e-41 | PREDICTED: GATA transcription factor 8 [Beta vulgaris subsp. vulgaris] |
JMSF045J17 | Sequence | 740 | 005872 (8) | ref|XP_009628969.1| | 2e-59 | PREDICTED: LOW QUALITY PROTEIN: GATA transcription factor 8-like [Nicotiana tom | 758 | 005872 (8) | ref|XP_009760862.1| | 7e-45 | PREDICTED: GATA transcription factor 8-like [Nicotiana sylvestris] ref|XP_009760 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig005872============================================1446 17 -------------------------->JMFF010M17 <----------------------------------------------------rJMFF010M17 73 --------------------------------------->JMFF001A06 <-----------------------------------------------------rJMFF001A06 73 --------------------------------------->JMFF011K10 <-----------------------------------------------rJMFF011K10 200 -------------------------------------->JMSF045J17 <--------------------------------------------------rJMSF045J17
The following clones don't have the opposite end in this pair.