clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN006P01 | Sequence | 637 | 011415 (9) | emb|CDO97214.1| | 7e-45 | unnamed protein product [Coffea canephora] | |||||
JMFN017A24 | Sequence | 591 | 011415 (9) | emb|CDO97214.1| | 5e-45 | unnamed protein product [Coffea canephora] | |||||
JMFN043K21 | Sequence | 604 | 011415 (9) | emb|CDO97214.1| | 5e-45 | unnamed protein product [Coffea canephora] | |||||
JMSF010H16 | Sequence | 368 | 011415 (9) | emb|CDO97214.1| | 1e-16 | unnamed protein product [Coffea canephora] | 632 | 011415 (9) | emb|CDO97214.1| | 7e-45 | unnamed protein product [Coffea canephora] |
JMSF029I21 | Sequence | 680 | 011415 (9) | emb|CDO97214.1| | 9e-45 | unnamed protein product [Coffea canephora] | 638 | 011415 (9) | emb|CDO97214.1| | 6e-45 | unnamed protein product [Coffea canephora] |
JMSF045J10 | Sequence | 701 | 011415 (9) | ref|XP_006346369.1| | 4e-43 | PREDICTED: stress enhanced protein 1, chloroplastic-like isoform X1 [Solanum tu | 644 | 011415 (9) | ref|XP_006346369.1| | 6e-43 | PREDICTED: stress enhanced protein 1, chloroplastic-like isoform X1 [Solanum tu |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011415============================================ 706 65 --------------------------------------------------------------------------------------------------->JMSF045J10 <------------------------------------------------------------------------------------------rJMSF045J10 74 --------------------------------------------------->JMSF010H16 <-----------------------------------------------------------------------------------------rJMSF010H16 78 ----------------------------------------------------------------------------------------------->JMSF029I21 <----------------------------------------------------------------------------------------rJMSF029I21
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------------->JMFN043K21- ----------------------------------------------------------------------------------->JMFN017A24- ----------------------------------------------------------------------------------------->JMFN006P01-