Contig 011415:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN006P01Sequence637011415 (9)emb|CDO97214.1|7e-45unnamed protein product [Coffea canephora]
JMFN017A24Sequence591011415 (9)emb|CDO97214.1|5e-45unnamed protein product [Coffea canephora]
JMFN043K21Sequence604011415 (9)emb|CDO97214.1|5e-45unnamed protein product [Coffea canephora]
JMSF010H16Sequence368011415 (9)emb|CDO97214.1|1e-16unnamed protein product [Coffea canephora]632011415 (9)emb|CDO97214.1|7e-45unnamed protein product [Coffea canephora]
JMSF029I21Sequence680011415 (9)emb|CDO97214.1|9e-45unnamed protein product [Coffea canephora]638011415 (9)emb|CDO97214.1|6e-45unnamed protein product [Coffea canephora]
JMSF045J10Sequence701011415 (9)ref|XP_006346369.1|4e-43PREDICTED: stress enhanced protein 1, chloroplastic-like isoform X1 [Solanum tu644011415 (9)ref|XP_006346369.1|6e-43PREDICTED: stress enhanced protein 1, chloroplastic-like isoform X1 [Solanum tu

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF029I21+                         TGCTAGAAAAATTGTGAGTTGTTCAATATGAGGAACACAGAAAAAC
JMSF045J10+                          GCTAGAAAAATTGTGAGTTGTTCAATATGAGGAACACAGAAAAAC
                      ____________________________________________________________
consensus                           TGCTAGAAAAATTGTGAGTTGTTCAATATGAGGAACACAGAAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-              AGTTGGCAAGATCTGTTGATCTCTTCTTTCTACAGTATGGCAACTTCCTGC-TAAC
JMSF029I21+           TTCAAGTTGGCAAGATCTGTTGATCTCTTCTTTCTACAGTATGGCAACTTCCTGC-TAAC
JMFN043K21+                                              ACAGTATGGCAACTTCCTGC-TAAC
JMFN017A24+                                                            TCCTGC-TAAC
JMFN006P01+                 TTGGCAAGATCTGTTGATCTCTTCTTTCTACAGTATGGCAACTTCCTGC-TAAC
rJMSF010H16-                      AGATCTGTTGATCTCTTCTTTCTACAGTATGGCAACTTCCTGC-TAAC
JMSF045J10+           TTCAAGTTGGCAAGATCTGTTGATCTCTTCTTTCTACAGTATGGCAACTTCCTGC-TAAC
rJMSF045J10-                             TTGATCTCTTCTTTCTACAGTATGGCANCTTCCTGCGTAAC
                      ____________________________________________________________
consensus             TTCAAGTTGGCAAGATCTGTTGATCTCTTCTTTCTACAGTATGGCAACTTCCTGC-TAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          ACATACATATCTGATGACAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
JMSF029I21+           ACATACATATCTGATGACAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
JMFN043K21+           ACATACATATCTGATGACAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
JMFN017A24+           ACATACATATCTGATGACAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
JMFN006P01+           ACATACATATCTGATGACAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
rJMSF010H16-          ACATACATATCTGATGACAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
JMSF045J10+           ACATACATATCTGATGACAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
rJMSF045J10-          ACATACATATCTGATGANAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
                      ____________________________________________________________
consensus             ACATACATATCTGATGACAAGAATTGAAAATTTTTCACATTTTCTTTACTAGAACACAGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
JMSF029I21+           TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
JMFN043K21+           TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
JMFN017A24+           TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
JMFN006P01+           TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
rJMSF010H16-          TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
JMSF045J10+           TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
rJMSF045J10-          TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
                      ____________________________________________________________
consensus             TAAAAGAAACATCATGTGATTCAATTCTTGGAGGCAGATTGGAAGATGAAAACTGCTGTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
JMSF029I21+           AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
JMFN043K21+           AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
JMFN017A24+           AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
JMFN006P01+           AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
rJMSF010H16-          AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
JMSF045J10+           AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
rJMSF045J10-          AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
                      ____________________________________________________________
consensus             AGAATGCCCACCAATGCTGTAACGCCGAGGGCTACAGTTGGTAAGGGAGTTATGAGCCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
JMSF029I21+           AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
JMFN043K21+           AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
JMFN017A24+           AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
JMFN006P01+           AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
JMSF010H16+                                                CACTGATAGCAATTGCAAAGCCA
rJMSF010H16-          AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
JMSF045J10+           AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
rJMSF045J10-          AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
                      ____________________________________________________________
consensus             AAGTTCTCAAGCAGTCCTTTGCCTGTTGATATTTCCACACTGATAGCAATTGCAAAGCCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
JMSF029I21+           AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
JMFN043K21+           AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
JMFN017A24+           AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
JMFN006P01+           AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
JMSF010H16+           AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
rJMSF010H16-          AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
JMSF045J10+           AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
rJMSF045J10-          AGCATAGCANATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
                      ____________________________________________________________
consensus             AGCATAGCAAATCGACCAAGCCAGACGTCCAAACTACTACTGCTTTCCTTGCTACTCTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
JMSF029I21+           TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
JMFN043K21+           TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
JMFN017A24+           TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
JMFN006P01+           TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
JMSF010H16+           TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
rJMSF010H16-          TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
JMSF045J10+           TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
rJMSF045J10-          TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
                      ____________________________________________________________
consensus             TCGCATCTTACGGTAACCAATGCTCCTTTAGGGGCATGTTTGGTTGGATATGAAGTCCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          AGGACTGGAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
JMSF029I21+           AGGACTGGAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
JMFN043K21+           AGGACTGGAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
JMFN017A24+           AGGACTGGAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
JMFN006P01+           AGGACTGGAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
JMSF010H16+           AGGACTGGAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
rJMSF010H16-          AGGACTGGAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
JMSF045J10+           AGGA---GAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
rJMSF045J10-          AGGA---GAAGAGGGGAGCCAGTANCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
                      ____________________________________________________________
consensus             AGGACTGGAAGAGGGGAGCCAGTAGCAAAGGTAGTTCCCAATCGAGCCAAACTCGACGGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
JMSF029I21+           CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
JMFN043K21+           CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
JMFN017A24+           CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
JMFN006P01+           CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
JMSF010H16+           CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
rJMSF010H16-          CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
JMSF045J10+           CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
rJMSF045J10-          CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
                      ____________________________________________________________
consensus             CTGAACGGAGAACTCGAAGAAAGCCTCAATGGGGTTGAGATAACCACAGTATCGCGGACG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
JMSF029I21+           GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
JMFN043K21+           GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
JMFN017A24+           GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
JMFN006P01+           GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
JMSF010H16+           GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
rJMSF010H16-          GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
JMSF045J10+           GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
rJMSF045J10-          GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
                      ____________________________________________________________
consensus             GAAGTGCAAAGGGAGCTGGAGATTTGAAGTACAGCGGCGGCCATGTCTTCCGGCAAGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF029I21-          ACGGGATGGAGGAGATTATTGACGGAAACCTC                            
JMSF029I21+           ACGGGATGGAGGAGATTATTGACGGAAACCTC                            
JMFN043K21+           ACGGGATGGAGGAGATTATTGACGGAAACCTCTCAATTTC                    
JMFN017A24+           ACGGGATGGAGGAGATTATTGACGGAAACCTCTCAATTTCT                   
JMFN006P01+           ACGGGATGGAGGAGATTATTGACGGAAACCTCTCAATTTCTA                  
JMSF010H16+           ACGGGATGGAGGAGATTATTGACGGAAACCTCTCAATTTCTATC                
rJMSF010H16-          ACGGGATGGAGGAGATTATTGACGGAAACCTCTCAATTTCTATC                
JMSF045J10+           ACGGGATGGAGGAGATTATTGACGGAAACCTCTCAATTTCTATCAATTCTCTCTCTCTCC
rJMSF045J10-          ACGGGATGGAGGAGATTATTGACGGAAACCTCTCAATTTCTATCAATTCTCTCTCTCTCC
                      ____________________________________________________________
consensus             ACGGGATGGAGGAGATTATTGACGGAAACCTCTCAATTTCTATCAATTCTCTCTCTCTCC