| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF003G20 | Sequence | 481 | 012393 (8) | ref|XP_009611771.1| | 8e-97 | PREDICTED: ras-related protein Rab7 [Nicotiana tomentosiformis] ref|XP_009764140 | 802 | 012393 (8) | emb|CDO98034.1| | 1e-126 | unnamed protein product [Coffea canephora] |
| JMFF040C10 | Sequence | 509 | 012393 (8) | gb|AJG06868.1| | 3e-86 | Rab GTPase [Nicotiana benthamiana] | 773 | 012393 (8) | emb|CDO98034.1| | 6e-132 | unnamed protein product [Coffea canephora] |
| JMSF009K14 | Sequence | 427 | 012393 (8) | ref|XP_004235664.1| | 8e-77 | PREDICTED: ras-related protein Rab7 [Solanum lycopersicum] ref|XP_006343066.1| P | 792 | 012393 (8) | emb|CDO98034.1| | 2e-131 | unnamed protein product [Coffea canephora] |
| JMSF023B24 | Sequence | 599 | 012393 (8) | ref|NP_001274838.1| | 9e-86 | uncharacterized protein LOC102577689 [Solanum tuberosum] ref|XP_004230949.1| PRE | |||||
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig012393============================================1012 185 ------------------------------------->JMFF040C10 <----------------------------------------------------------------------------rJMFF040C10 194 --------------------------------->JMSF009K14 <-----------------------------------------------------------------------------rJMSF009K14 194 ----------------------------------------->JMFF003G20 <------------------------------------------------------------------------------rJMFF003G20
The following clones don't have the opposite end in this pair.
---------------------------------------------------------->JMSF023B24- <-----------------------------------------rJMSF030G20*