clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015E09 | Sequence | 539 | 006004 (8) | ref|XP_009622550.1| | 3e-36 | PREDICTED: protein PXR1 [Nicotiana tomentosiformis] | 713 | 006004 (8) | ref|XP_009796003.1| | 1e-39 | PREDICTED: protein PXR1 [Nicotiana sylvestris] |
JMFF030K24 | Sequence | 536 | 006004 (8) | ref|XP_009622550.1| | 1e-31 | PREDICTED: protein PXR1 [Nicotiana tomentosiformis] | 662 | 006004 (8) | ref|XP_009796003.1| | 1e-36 | PREDICTED: protein PXR1 [Nicotiana sylvestris] |
JMFN008P11 | Sequence | 611 | 006004 (8) | ref|XP_009796003.1| | 3e-44 | PREDICTED: protein PXR1 [Nicotiana sylvestris] | |||||
JMSF024A06 | Sequence | 662 | 006004 (8) | ref|XP_009796003.1| | 2e-44 | PREDICTED: protein PXR1 [Nicotiana sylvestris] | 722 | 006004 (8) | ref|XP_009796003.1| | 4e-44 | PREDICTED: protein PXR1 [Nicotiana sylvestris] |
JMSF024A07 | Sequence | 609 | 006004 (8) | ref|XP_009796003.1| | 1e-38 | PREDICTED: protein PXR1 [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig006004============================================ 833 1 --------------------------------------------------------------->JMFF030K24 <------------------------------------------------------------------------------rJMFF030K24 65 ---------------------------------------------------------------->JMFF015E09 <-------------------------------------------------------------------------------------rJMFF015E09 119 ------------------------------------------------------------------------------>JMSF024A06 <-------------------------------------------------------------------------------------rJMSF024A06
The following clones don't have the opposite end in this pair.
<----------------------------------------------------------------------rJMSF024A07- ------------------------------------------------------------------------>JMFN008P11-