clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN017J22 | Sequence | 548 | 007531 (7) | ref|XP_006373445.1| | 1e-16 | hypothetical protein POPTR_0017s13830g [Populus trichocarpa] gb|ERP51242.1| hypo | |||||
JMFN019O06 | Sequence | 615 | 007531 (7) | ref|XP_006373445.1| | 2e-15 | hypothetical protein POPTR_0017s13830g [Populus trichocarpa] gb|ERP51242.1| hypo | |||||
JMFN033M07 | Sequence | 548 | 007531 (7) | ref|XP_006373445.1| | 2e-15 | hypothetical protein POPTR_0017s13830g [Populus trichocarpa] gb|ERP51242.1| hypo | |||||
JMSF033G09 | Sequence | 633 | 007531 (7) | ref|XP_006373445.1| | 3e-15 | hypothetical protein POPTR_0017s13830g [Populus trichocarpa] gb|ERP51242.1| hypo | 577 | 007531 (7) | ref|XP_006373445.1| | 2e-15 | hypothetical protein POPTR_0017s13830g [Populus trichocarpa] gb|ERP51242.1| hypo |
JMSF033I11 | Sequence | 635 | 007531 (7) | ref|XP_006373445.1| | 3e-15 | hypothetical protein POPTR_0017s13830g [Populus trichocarpa] gb|ERP51242.1| hypo | 576 | 007531 (7) | ref|XP_006373445.1| | 2e-15 | hypothetical protein POPTR_0017s13830g [Populus trichocarpa] gb|ERP51242.1| hypo |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007531============================================ 643 67 -------------------------------------------------------------------------------------------------->JMSF033I11 <-----------------------------------------------------------------------------------------rJMSF033I11 82 ------------------------------------------------------------------------------------------------->JMSF033G09 <--------------------------------------------------------------------------------------rJMSF033G09
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------------>JMFN033M07- ------------------------------------------------------------------------------------>JMFN017J22- ----------------------------------------------------------------------------------------------->JMFN019O06-