clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005B21 | Sequence | 429 | 010060 (9) | emb|CDP03765.1| | 1e-79 | unnamed protein product [Coffea canephora] | 571 | 010060 (9) | ref|XP_008235643.1| | 1e-82 | PREDICTED: 60S ribosomal protein L14-1 [Prunus mume] |
JMFF014D11 | Sequence | 571 | 010060 (9) | ref|XP_008235643.1| | 9e-83 | PREDICTED: 60S ribosomal protein L14-1 [Prunus mume] | 571 | 010060 (9) | ref|XP_008235643.1| | 9e-83 | PREDICTED: 60S ribosomal protein L14-1 [Prunus mume] |
JMFF040E16 | Sequence | 571 | 010060 (9) | ref|XP_008235643.1| | 9e-83 | PREDICTED: 60S ribosomal protein L14-1 [Prunus mume] | 601 | 010060 (9) | emb|CDP03765.1| | 1e-59 | unnamed protein product [Coffea canephora] |
JMFN009K16 | Sequence | 588 | 010060 (9) | ref|XP_008235643.1| | 1e-82 | PREDICTED: 60S ribosomal protein L14-1 [Prunus mume] | |||||
JMFN044F21 | Sequence | 576 | 010060 (9) | ref|XP_008235643.1| | 2e-82 | PREDICTED: 60S ribosomal protein L14-1 [Prunus mume] | |||||
JMSF041L21 | Sequence | 561 | 010060 (9) | ref|XP_004953139.1| | 9e-57 | PREDICTED: 60S ribosomal protein L14-1-like isoform X2 [Setaria italica] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010060============================================ 578 6 -------------------------------------------------------------------------------------------------->JMFF014D11 <--------------------------------------------------------------------------------------------------rJMFF014D11 10 ------------------------------------------------------------------------->JMFF005B21 <-------------------------------------------------------------------------------------------------rJMFF005B21 120 -------------------------------------------------------------------------------------------------->JMFF040E16 <------------------------------------------------------------------------------rJMFF040E16
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------->JMFN044F21- <------------------------------------------------------------------------------------------------rJMSF041L21- ----------------------------------------------------------------------------->JMFN009K16-