clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF001L05 | Sequence | 798 | 010959 (10) | ref|XP_010691314.1| | 3e-16 | PREDICTED: splicing factor, arginine/serine-rich 19-like isoform X2 [Beta vulga | |||||
JMFF025P17 | Sequence | 514 | 010959 (10) | ref|XP_010691314.1| | 2e-20 | PREDICTED: splicing factor, arginine/serine-rich 19-like isoform X2 [Beta vulga | 697 | 010959 (10) | ref|XP_010691314.1| | 8e-20 | PREDICTED: splicing factor, arginine/serine-rich 19-like isoform X2 [Beta vulga |
JMFF042N24 | Sequence | 563 | 010959 (10) | ref|XP_010691314.1| | 3e-20 | PREDICTED: splicing factor, arginine/serine-rich 19-like isoform X2 [Beta vulga | 504 | 010959 (10) | ref|XP_010033876.1| | 1e-18 | PREDICTED: atherin-like [Eucalyptus grandis] gb|KCW53724.1| hypothetical protein |
JMFF048N05 | Sequence | 385 | 010959 (10) | ref|XP_010691314.1| | 3e-20 | PREDICTED: splicing factor, arginine/serine-rich 19-like isoform X2 [Beta vulga | 381 | 010959 (10) | |||
JMFN010G06 | Sequence | 616 | 010959 (10) | ref|XP_010691314.1| | 7e-20 | PREDICTED: splicing factor, arginine/serine-rich 19-like isoform X2 [Beta vulga | |||||
JMSF007O07 | Sequence | 239 | 010959 (10) | 710 | 010959 (10) | ref|XP_010691314.1| | 8e-20 | PREDICTED: splicing factor, arginine/serine-rich 19-like isoform X2 [Beta vulga |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig010959============================================ 827 79 ------------------------------------------------------------------->JMFF042N24 <-----------------------------------------------------------rJMFF042N24 116 ---------------------------->JMSF007O07 <-------------------------------------------------------------------------------------rJMSF007O07 132 ---------------------------------------------->JMFF048N05 <--------------------------------------------rJMFF048N05 138 ------------------------------------------------------------->JMFF025P17 <----------------------------------------------------------------------------------rJMFF025P17
The following clones don't have the opposite end in this pair.
-------------------------------------------------------------------------->JMFN010G06- <-----------------------------------------------------------------------------------------------rJMFF001L05-