clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011O01 | Sequence | 594 | 001186 (6) | emb|CDO99437.1| | 1e-20 | unnamed protein product [Coffea canephora] | 731 | 001186 (6) | ref|XP_009631705.1| | 116 | PREDICTED: uncharacterized protein LOC104121413 [Nicotiana tomentosiformis] |
JMFF042C13 | Sequence | 659 | 001186 (6) | emb|CDO99437.1| | 2e-20 | unnamed protein product [Coffea canephora] | 595 | 001186 (6) | ref|XP_009631705.1| | 116 | PREDICTED: uncharacterized protein LOC104121413 [Nicotiana tomentosiformis] |
JMFF044H17 | Sequence | 613 | 001186 (6) | emb|CDO99437.1| | 2e-20 | unnamed protein product [Coffea canephora] | 607 | 001186 (6) | ref|XP_009631705.1| | 116 | PREDICTED: uncharacterized protein LOC104121413 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001186============================================ 999 1 ---------------------------------------------------------->JMFF044H17 <------------------------------------------------------------rJMFF044H17 181 ----------------------------------------------->JMFF042C13 <-----------------------------------------------------------rJMFF042C13 203 ---------------------------------------->JMFF011O01 <------------------------------------------------------------------------rJMFF011O01
The following clones don't have the opposite end in this pair.