clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF005C08 | Sequence | 227 | 012432 (9) | gb|KCW52702.1| | 1e-34 | hypothetical protein EUGRSUZ_J02067 [Eucalyptus grandis] | |||||
JMFF014H15 | Sequence | 543 | 012432 (9) | ref|XP_010535539.1| | 1e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] | 678 | 012432 (9) | ref|XP_010535539.1| | 5e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] |
JMFF020G08 | Sequence | 476 | 012432 (9) | ref|XP_010535539.1| | 5e-49 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] | 653 | 012432 (9) | ref|XP_010535539.1| | 4e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] |
JMFF044L05 | Sequence | 626 | 012432 (9) | ref|XP_010535539.1| | 3e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] | 635 | 012432 (9) | ref|XP_010535539.1| | 6e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] |
JMSF002D24 | Sequence | 367 | 012432 (9) | ref|NP_180440.1| | 2e-20 | histone H2B [Arabidopsis thaliana] sp|Q9SI96.3|H2B3_ARATH RecName: Full=Histone | 644 | 012432 (9) | ref|XP_010535539.1| | 3e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012432============================================ 719 4 -------------------------------------------------------------------------------------->JMFF044L05 <---------------------------------------------------------------------------------------rJMFF044L05 77 -------------------------------------------------->JMSF002D24 <-----------------------------------------------------------------------------------------rJMSF002D24 204 ----------------------------------------------------------------->JMFF020G08 <-------------------------------------------------------------------rJMFF020G08 204 --------------------------------------------------------------------------->JMFF014H15 <-----------------------------------------------------------------------rJMFF014H15
The following clones don't have the opposite end in this pair.
<-------------------------------rJMFF005C08-