| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005C08 | Sequence | 227 | 012432 (9) | gb|KCW52702.1| | 1e-34 | hypothetical protein EUGRSUZ_J02067 [Eucalyptus grandis] | |||||
| JMFF014H15 | Sequence | 543 | 012432 (9) | ref|XP_010535539.1| | 1e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] | 678 | 012432 (9) | ref|XP_010535539.1| | 5e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] |
| JMFF020G08 | Sequence | 476 | 012432 (9) | ref|XP_010535539.1| | 5e-49 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] | 653 | 012432 (9) | ref|XP_010535539.1| | 4e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] |
| JMFF044L05 | Sequence | 626 | 012432 (9) | ref|XP_010535539.1| | 3e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] | 635 | 012432 (9) | ref|XP_010535539.1| | 6e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] |
| JMSF002D24 | Sequence | 367 | 012432 (9) | ref|NP_180440.1| | 2e-20 | histone H2B [Arabidopsis thaliana] sp|Q9SI96.3|H2B3_ARATH RecName: Full=Histone | 644 | 012432 (9) | ref|XP_010535539.1| | 3e-57 | PREDICTED: histone H2B.11-like [Tarenaya hassleriana] |
This contig is upended
. : . : . : . : . : . :
JMFF044L05- CAACAACCCATCCGGAATCCCTCTGATTTTCCAGTTTCTCATCTCTCTCTCGATC
rJMFF014H15+ GCCAACAACCCATCCGGAATCCCTCTGATTTTCCAGTTTCTCATCTCTCTCTCGATC
rJMFF020G08+ TGATTTTCCAGTTTCTCATCTCTCTCTCGATC
JMFF020G08- GCCAACAACCCATCCGGAATCCCTCTGATTTTCCAGTTTCTCATCTCTCTCTCGATC
JMFF014H15- GCCAACAACCCATCCGGAATCCCTCTGATTTTCCAGTTTCTCATCTCTCTCTCGATC
JMSF002D24- GCCAACAACCCATCCGGAATCCCTCTGATTTTCCAGTTTCTCATCTCTCTCTCGATC
rJMSF002D24+ GGGCCAACAACCCATCCGGAATCCCTCTGATTTTCCAGTTTCTCATCTCTCTCTCGATC
____________________________________________________________
consensus GGGCCAACAACCCATCCGGAATCCCTCTGATTTTCCAGTTTCTCATCTCTCTCTCGATC
. : . : . : . : . : . :
JMFF044L05- GATCTAGAAATCTTGTAAGATGGCTCCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
rJMFF014H15+ GATCTAGAAATCTTGTAAGATGGCTCCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
rJMFF020G08+ GATCTAGAAATCTTGTAAGATGGCTCCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
JMFF020G08- GATCTAGAAATCTTGTAAGATGGCTCCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
JMFF014H15- GATCTAGAAATCTTGTAAGATGGCTCCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
JMSF002D24- GATCTAGAAATCTTGTAAGATGGCTCCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
rJMSF002D24+ GATCTAGAAATCTTGTAAGATGGCTCCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
rJMFF044L05+ CCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
____________________________________________________________
consensus GATCTAGAAATCTTGTAAGATGGCTCCAAAGGCGGAGAAGAAGACTGCGGAAGAGAAGGC
. : . : . : . : . : . :
JMFF044L05- GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
rJMFF014H15+ GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
rJMFF020G08+ GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
JMFF020G08- GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
JMFF014H15- GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
JMSF002D24- GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
rJMSF002D24+ GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
rJMFF044L05+ GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
____________________________________________________________
consensus GGCGGCCGTAGGCGACAAGGCGGCGGCGGAGAAGAAGCCTTCCAAGGCCGGGAAGAAGCT
. : . : . : . : . : . :
JMFF044L05- CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
rJMFF014H15+ CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
rJMFF020G08+ CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
JMFF020G08- CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
JMFF014H15- CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
JMSF002D24- CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
rJMSF002D24+ CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
rJMFF044L05+ CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
____________________________________________________________
consensus CCCGAAGGAGGCCGGCGGCGCCGCTTCCGGCGAAAAGAAGAGGAAGAAGGCGAAGAAGAG
. : . : . : . : . : . :
JMFF044L05- CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
rJMFF014H15+ CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
rJMFF020G08+ CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
JMFF020G08- CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
rJMFF005C08+ ACCCTGACATCGG
JMFF014H15- CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
JMSF002D24- CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
rJMSF002D24+ CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
rJMFF044L05+ CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
____________________________________________________________
consensus CACCGAGACTTACAAGATCTATATCTTCAAGGTCCTGAAACAGGTCCACCCTGACATCGG
. : . : . : . : . : . :
JMFF044L05- GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
rJMFF014H15+ GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
rJMFF020G08+ GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
JMFF020G08- GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
rJMFF005C08+ GATCTCCAGCAAGGCCATGGGGATCANGAACAGNTTCATCAATGATATNTTCGAGAAGCN
JMFF014H15- GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
JMSF002D24- GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
rJMSF002D24+ GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
rJMFF044L05+ GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
____________________________________________________________
consensus GATCTCCAGCAAGGCCATGGGGATCATGAACAGCTTCATCAATGATATCTTCGAGAAGCT
. : . : . : . : . : . :
JMFF044L05- GGCGCAGGAGGCTTCGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
rJMFF014H15+ GGCGCAGGAGGCTTCGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
rJMFF020G08+ GGCGCAGGAGGCTTCGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
JMFF020G08- GGCGCAGGAGGCTTCGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
rJMFF005C08+ GGCGCAGGAGGCTTNGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
JMFF014H15- GGCGCAGGAGGCTTCGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
JMSF002D24- GGCGCAGG
rJMSF002D24+ GGCGCAGGAGGCTTCGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
rJMFF044L05+ GGCGCAGGAGGCTTCGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
____________________________________________________________
consensus GGCGCAGGAGGCTTCGAGGCTCGCGCGCTACAACAAGAAGCCGACGATCACCTCCCGGGA
. : . : . : . : . : . :
JMFF044L05- GATCCAGACGGCGGTGCGGCTTGTGCTTCCCGGTGAACTGGCTAAGCACGCCGTCTCTGA
rJMFF014H15+ GATCCAGACGGCGGTGCGGCTTGTGCTTCCCGGTGAACTGGCTAAGCACGCCGTCTCTGA
rJMFF020G08+ GATCCAGACGGCGGTGCGGCTTGTGCTTCCCGGTGAACTGGCTAAGCACGCCGTCTCTGA
JMFF020G08- GATCCAGACGGCGGTGCGGCTTGTGCTTCCCGGTGAACTGGCTAAGCACGCCGTCTCTG
rJMFF005C08+ GATCCAGACGNCGGTGCGGCTTGTGCTTCCCNGTGAACTGGNTAAGCACNCCGTCTCTGA
JMFF014H15- GATCCAGACGGCGGTGCGGCTTGTGCTTCCCGGTGAACTGGCTAAGCACGCCGTCTCTGA
rJMSF002D24+ GATCCAGACGGCGGTGCGGCTTGTGCTTCCCGGTGAACTGGCTAAGCACGCCGTCTCTGA
rJMFF044L05+ GATCCAGACGGCGGTGCGGCTTGTGCTTCCCGGTGAACTGGCTAAGCACGCCGTCTCTGA
____________________________________________________________
consensus GATCCAGACGGCGGTGCGGCTTGTGCTTCCCGGTGAACTGGCTAAGCACGCCGTCTCTGA
. : . : . : . : . : . :
JMFF044L05- GGGGACTAAGGCGGTGACTAAGTTTACGAGCTCTTGAAGGTTTGATTGGTCTCTTTTTTG
rJMFF014H15+ GGGGACTAAGGCGGTGACTAAGTTTACGAGCTCTTGAA
rJMFF020G08+ GGGGACTAAGGCGGTGACTAAGTTTACGAGCTCTTGAA
rJMFF005C08+ GGNGACTAAGGCGGNGATTAAGTTTNCGAGCTCT
JMFF014H15- GGGGACTAAGGCGGTGACTAAGTTTACGAGCTCTTGAAGGTTTGATTGGTCTCTTTTTTG
rJMSF002D24+ GGGGACTAAGGCGGTGACTAAGTTTACGAGCTCTTGAAGGTTTGATTGGTCTCTTTTTTG
rJMFF044L05+ GGGGACTAAGGCGGTGACTAAGTTTACGAGCTCTTGAAGGTTTGATTGGTCTCTTTTTTG
____________________________________________________________
consensus GGGGACTAAGGCGGTGACTAAGTTTACGAGCTCTTGAAGGTTTGATTGGTCTCTTTTTTG
. : . : . : . : . : . :
JMFF044L05- GATGTAGAATTTTAGGGATGTGATAAANCACAGTAATTTCAGTCGTAATTTGTCTTTTGG
JMFF014H15- GATGTA
rJMSF002D24+ GATGTAGAATTTTAGGGATGTGATAAACAACAGTAATTTCAGTCGTAATTTGTCTTTTGG
rJMFF044L05+ GATGTAGAATTTTAGGGATGTGATAAACAACAGTAATTTCAGTCGTAATTTGTCTTTTGG
____________________________________________________________
consensus GATGTAGAATTTTAGGGATGTGATAAACAACAGTAATTTCAGTCGTAATTTGTCTTTTGG
. : . : . : . : . : . :
JMFF044L05- GGTTTAGATTATAGAATCAGTTGTTGGATTT
rJMSF002D24+ GGTTTAGATTATAGAATCAGTTGTTGGATTTGTGTCTCTTCTCTT
rJMFF044L05+ GGTTTAGATTATAGAATCAGTTGTTGGATTTGTGTCTCTTCTCTTTTGTTGCACATGTAC
____________________________________________________________
consensus GGTTTAGATTATAGAATCAGTTGTTGGATTTGTGTCTCTTCTCTTTTGTTGCACATGTAC
. : . : . : . : . : . :
rJMFF044L05+ AATCCGAAGCATTAATGGCAAATCTTTCATTGCAAAAAAAAAAAAAAAACTCTCCAGGGT
____________________________________________________________
consensus AATCCGAAGCATTAATGGCAAATCTTTCATTGCAAAAAAAAAAAAAAAACTCTCCAGGGT