clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011N02 | Sequence | 524 | 008177 (6) | ref|XP_004238823.1| | 5e-20 | PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum lycopersicum] | 714 | 008177 (6) | ref|XP_004238823.1| | 7e-31 | PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum lycopersicum] |
JMFF018I06 | Sequence | 528 | 008177 (6) | ref|XP_006355109.1| | 3e-31 | PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum tuberosum] | 696 | 008177 (6) | ref|XP_006355109.1| | 8e-32 | PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum tuberosum] |
JMFN002C05 | Sequence | 520 | 008177 (6) | gb|KJB80208.1| | 3e-22 | hypothetical protein B456_013G086200 [Gossypium raimondii] | |||||
JMFN038E05 | Sequence | 596 | 008177 (6) | ref|XP_006355109.1| | 3e-32 | PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008177============================================ 744 29 --------------------------------------------------------------------->JMFF011N02 <-----------------------------------------------------------------------------------------------rJMFF011N02 46 ---------------------------------------------------------------------->JMFF018I06 <---------------------------------------------------------------------------------------------rJMFF018I06
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------>JMFN038E05- --------------------------------------------------------------------->JMFN002C05-