clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF026G21 | Sequence | 604 | 008295 (15) | ref|XP_006338353.1| | 6e-26 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] | 607 | 008295 (15) | ref|XP_006338353.1| | 6e-26 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] |
JMFF039M24 | Sequence | 583 | 008295 (15) | emb|CDP02330.1| | 6e-26 | unnamed protein product [Coffea canephora] | 612 | 008295 (15) | emb|CDP02330.1| | 6e-25 | unnamed protein product [Coffea canephora] |
JMFF041E18 | Sequence | 626 | 008295 (15) | emb|CDP02330.1| | 9e-26 | unnamed protein product [Coffea canephora] | 574 | 008295 (15) | emb|CDP02330.1| | 6e-26 | unnamed protein product [Coffea canephora] |
JMFN004L05 | Sequence | 505 | 008295 (15) | emb|CDP02330.1| | 3e-26 | unnamed protein product [Coffea canephora] | |||||
JMFN020A16 | Sequence | 520 | 008295 (15) | emb|CDP02330.1| | 4e-26 | unnamed protein product [Coffea canephora] | |||||
JMFN028D06 | Sequence | 507 | 008295 (15) | emb|CDP02330.1| | 3e-26 | unnamed protein product [Coffea canephora] | |||||
JMFN032D07 | Sequence | 536 | 008295 (15) | emb|CDP02330.1| | 4e-26 | unnamed protein product [Coffea canephora] | |||||
JMFN039B17 | Sequence | 486 | 008295 (15) | ref|XP_006338353.1| | 2e-12 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] | |||||
JMFN039F03 | Sequence | 423 | 008295 (15) | ref|XP_006338353.1| | 6e-13 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] | |||||
JMFN046L11 | Sequence | 494 | 008295 (15) | emb|CDP02330.1| | 4e-26 | unnamed protein product [Coffea canephora] | |||||
JMFS020D05 | Sequence | 543 | 008295 (15) | emb|CDP02330.1| | 4e-26 | unnamed protein product [Coffea canephora] | |||||
JMSF043G06 | Sequence | 372 | 008295 (15) | ref|XP_006338353.1| | 6e-13 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008295============================================ 613 7 --------------------------------------------------------------------------------------------->JMFF039M24 <---------------------------------------------------------------------------------------------------rJMFF039M24 7 -------------------------------------------------------------------------------------------------->JMFF026G21 <--------------------------------------------------------------------------------------------------rJMFF026G21 9 ----------------------------------------------------------------->JMFF041E18 <---------------------------------------------------------------------------------------------rJMFF041E18
The following clones don't have the opposite end in this pair.
----------------------------------------->JMFN039B17- <-----------------------------------------------------------rJMSF043G06- <--------------------------------------------------------------------------------JMFN046L11- <---------------------------------------------------------------------------------JMFN032D07- ---------------------------------------------------------------------------------->JMFN028D06- ------------------------------------------------------------------------------------>JMFN020A16- ---------------------------------------------------------------------------------------->JMFS020D05- <------------------------------------------------------------JMFN039F03- --------------------------------------------------------------------------------->JMFN004L05-