| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026G21 | Sequence | 604 | 008295 (15) | ref|XP_006338353.1| | 6e-26 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] | 607 | 008295 (15) | ref|XP_006338353.1| | 6e-26 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] |
| JMFF039M24 | Sequence | 583 | 008295 (15) | emb|CDP02330.1| | 6e-26 | unnamed protein product [Coffea canephora] | 612 | 008295 (15) | emb|CDP02330.1| | 6e-25 | unnamed protein product [Coffea canephora] |
| JMFF041E18 | Sequence | 626 | 008295 (15) | emb|CDP02330.1| | 9e-26 | unnamed protein product [Coffea canephora] | 574 | 008295 (15) | emb|CDP02330.1| | 6e-26 | unnamed protein product [Coffea canephora] |
| JMFN004L05 | Sequence | 505 | 008295 (15) | emb|CDP02330.1| | 3e-26 | unnamed protein product [Coffea canephora] | |||||
| JMFN020A16 | Sequence | 520 | 008295 (15) | emb|CDP02330.1| | 4e-26 | unnamed protein product [Coffea canephora] | |||||
| JMFN028D06 | Sequence | 507 | 008295 (15) | emb|CDP02330.1| | 3e-26 | unnamed protein product [Coffea canephora] | |||||
| JMFN032D07 | Sequence | 536 | 008295 (15) | emb|CDP02330.1| | 4e-26 | unnamed protein product [Coffea canephora] | |||||
| JMFN039B17 | Sequence | 486 | 008295 (15) | ref|XP_006338353.1| | 2e-12 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] | |||||
| JMFN039F03 | Sequence | 423 | 008295 (15) | ref|XP_006338353.1| | 6e-13 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] | |||||
| JMFN046L11 | Sequence | 494 | 008295 (15) | emb|CDP02330.1| | 4e-26 | unnamed protein product [Coffea canephora] | |||||
| JMFS020D05 | Sequence | 543 | 008295 (15) | emb|CDP02330.1| | 4e-26 | unnamed protein product [Coffea canephora] | |||||
| JMSF043G06 | Sequence | 372 | 008295 (15) | ref|XP_006338353.1| | 6e-13 | PREDICTED: protein SPIRAL1-like 1-like [Solanum tuberosum] | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF026G21- TATTTTTAGCAAC
rJMFF041E18- TTTTAGCAAC
JMFF026G21+ TTTTAGCAAC
rJMFF039M24- ATTTTTAGCAAC
____________________________________________________________
consensus TATTTTTAGCAAC
. : . : . : . : . : . :
rJMFF026G21- ACGACCACCAAACAAGTTAAAGAATACAATACAGTATTCGCAAAGATACCAAGCAAAGAA
JMFN004L05+ ACCAAGCAAAGAA
JMFN032D07- ACCAAGCAAAGAA
rJMFF041E18- ACGACCACCAAACAAGTTAAAGAATACAATACAGTATTCGCAAAGATACCAAGCAAAGAA
JMFN020A16+ AAGAA
JMFS020D05+ CGCAAAGATACCAAGCAAAGAA
JMFN039F03- ACCAAGCAAAGAA
JMFF026G21+ ACGACCACCAAACAAGTTAAAGAATACAATACAGTATTCGCAAAGATACCAAGCAAAGAA
JMFF039M24+ TAAAGAATACAATACAGTATTCGCAAAGATACCAAGCAAAGAA
JMFN028D06+ AAGAA
rJMFF039M24- ACGACCACCAAACAAGTTAAAGAATACAATACAGTATTCGCAAAGATACCAAGCAAAGAA
____________________________________________________________
consensus ACGACCACCAAACAAGTTAAAGAATACAATACAGTATTCGCAAAGATACCAAGCAAAGAA
. : . : . : . : . : . :
rJMFF026G21- AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
JMFN004L05+ AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
JMFN032D07- AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
rJMFF041E18- AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
JMFN046L11- CACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
JMFN020A16+ AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
JMFS020D05+ AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
rJMSF043G06- CTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
JMFN039F03- AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAAAGCAGCCA
JMFF026G21+ AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
JMFF039M24+ AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
JMFN028D06+ AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
rJMFF039M24- AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
____________________________________________________________
consensus AACGCTTGTTTCACATTCATACACTTATGATATTCATAATCTGGAAGTTCAGAGCAGCCA
. : . : . : . : . : . :
rJMFF026G21- AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFN004L05+ AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFN032D07- AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
rJMFF041E18- AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFN046L11- AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFN020A16+ AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFS020D05+ AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
rJMSF043G06- AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFN039F03- AGTCTAAATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFF026G21+ AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFF039M24+ AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
JMFN028D06+ AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
rJMFF039M24- AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGNAATGATATTCAAATTCACTTGC
____________________________________________________________
consensus AGTCTAGATAGTAGTAAAGGAATCCCTTCAAATACAGTAATGATATTCAAATTCACTTGC
. : . : . : . : . : . :
rJMFF026G21- CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFN004L05+ CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFN032D07- AATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
rJMFF041E18- CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFN046L11- CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFN020A16+ CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFS020D05+ CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
rJMSF043G06- CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFN039F03- CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAAAGCCACCACCAGGGGCAGCTTGGA
JMFF026G21+ CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFF039M24+ CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFN028D06+ CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFF041E18+ CCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
JMFN039B17+ CCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
rJMFF039M24- CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
____________________________________________________________
consensus CATTGCCATCGCCACCGAATAGGTAACCCAGGGAAGAGCCACCACCAGGTGCAGCTTGGA
. : . : . : . : . : . :
rJMFF026G21- CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFN004L05+ CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFN032D07- CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
rJMFF041E18- CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFN046L11- CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFN020A16+ CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFS020D05+ CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
rJMSF043G06- CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFN039F03- CCTTGGTTGAGCGCCTTTCCGTAAAAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFF026G21+ CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFF039M24+ CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFN028D06+ CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFF041E18+ CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
JMFN039B17+ CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
rJMFF039M24- CCTTGGTTGAGCGCCTTTCCGNAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
____________________________________________________________
consensus CCTTGGTTGAGCGCCTTTCCGTAAGAAAGTTGCCACAATTCTGACCATCTGCACGGGTAT
. : . : . : . : . : . :
rJMFF026G21- AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFN004L05+ AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFN032D07- AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
rJMFF041E18- AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFN046L11- AGTTGTTTGCATTGCTGCTGAAAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFN020A16+ AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFS020D05+ AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
rJMSF043G06- AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFN039F03- AGTTGTTTGCATTGCTGCTGAAAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFF026G21+ AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFF039M24+ AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGGACTTGCTTACTGGCATCAGCAGGTT
JMFN028D06+ AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFF041E18+ AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
JMFN039B17+ AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
rJMFF039M24- AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGGACTTGCTTACTGGCATCAGCAGGTT
____________________________________________________________
consensus AGTTGTTTGCATTGCTGCTGAGAATGCCTGCAGGAACTTGCTTACTGGCATCAGCAGGTT
. : . : . : . : . : . :
rJMFF026G21- GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFN004L05+ GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFN032D07- GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
rJMFF041E18- GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFN046L11- GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFN020A16+ GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFS020D05+ GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
rJMSF043G06- GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFN039F03- GGGAAGCAGCACCACCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFF026G21+ GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFF039M24+ GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFN028D06+ GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFF041E18+ GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
JMFN039B17+ GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
rJMFF039M24- GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
____________________________________________________________
consensus GGGAAGCAGCAGCAGCAGCTGAAGGCTTGGGAGCAGGTGGATCATTTGAAACCTTTTCGG
. : . : . : . : . : . :
rJMFF026G21- GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACTTCCAAACAGATAACCCAATG
JMFN004L05+ GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
JMFN032D07- GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
rJMFF041E18- GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
JMFN046L11- GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
JMFN020A16+ GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
JMFS020D05+ GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
rJMSF043G06- GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGC
JMFF026G21+ GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACTTCCAAACAGATAACCCAATG
JMFF039M24+ GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
JMFN028D06+ GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
JMFF041E18+ GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
JMFN039B17+ GGTTCTGAGCAGGTTGAGGCTTGTTAGGA
rJMFF039M24- GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
____________________________________________________________
consensus GGTTCTGAGCAGGTTGAGGCTTGTTAGGAGCCTCTCCACCTCCAAACAGATAACCCAATG
. : . : . : . : . : . :
rJMFF026G21- AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFN004L05+ AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFN032D07- AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
rJMFF041E18- AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFN046L11- AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFN020A16+ AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFS020D05+ AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFF026G21+ AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFF039M24+ AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFN028D06+ AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
JMFF041E18+ AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
rJMFF039M24- AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
____________________________________________________________
consensus AACTCTGCCCACCTCCAGCACTTACTCCACGACCCATCCTTGTATAATTGGTTTCTCAAC
. : . : . : . : . : . :
rJMFF026G21- AACACGAAAGAACGTTCAACACCGAAGCAGGTTTAGAGAGAGAGTGATTGAGAG
JMFN004L05+ AACACGAAAGAA
JMFN032D07- AACACGAAA
rJMFF041E18- AACACGAAAGAACGTTCAACACCG
JMFN046L11- AACACGAAAGAACGTTCAACACCGA
JMFN020A16+ AACACGAAAGAACGTTCAACACCGAAGCAGGTTTA
JMFS020D05+ AACACGAAAGAACGTTCAACACCGAAGCAGGTTTAGAGAGA
JMFF026G21+ AACACGAAAGAACGTTCAACACCGAAGCAGGTTTAGAGAGAGAGTGATTGAGAG
JMFF039M24+ AACACGAAAGAACGTTCAACACCGAAGCAGGTTTAGAGAGAGAGTGATTGAGAG
JMFN028D06+ AACACGAAAAAACGTTCAACAC
JMFF041E18+ AACACGAAAGAACGTTCAACACCGAAGCAGGTTTAGAGAGAGAGTGATTGAGAG
rJMFF039M24- AACACGAAAGAACGTTCAACACCGAAGCAGGTTTAGAGAGAGAGTGATTGAGAGAGCTAT
____________________________________________________________
consensus AACACGAAAGAACGTTCAACACCGAAGCAGGTTTAGAGAGAGAGTGATTGAGAGAGCTAT