| clone | seq. | 5'-sequence | 3'-sequence | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
| JMFF007L17 | Sequence | 549 | 013712 (14) | ref|XP_008235977.1| | 1e-70 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 786 | 013712 (14) | ref|XP_010240027.1| | 5e-60 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l |
| JMFF018I01 | Sequence | 475 | 013712 (14) | ref|XP_010548146.1| | 1e-75 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 757 | 013712 (14) | ref|XP_002454117.1| | 3e-69 | hypothetical protein SORBIDRAFT_04g024840 [Sorghum bicolor] gb|EES07093.1| hypot |
| JMFF023D14 | Sequence | 441 | 013712 (14) | ref|XP_009345931.1| | 4e-57 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 795 | 013712 (14) | ref|XP_002454117.1| | 2e-67 | hypothetical protein SORBIDRAFT_04g024840 [Sorghum bicolor] gb|EES07093.1| hypot |
| JMFF040H03 | Sequence | 441 | 013712 (14) | ref|XP_009345931.1| | 4e-65 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 762 | 013712 (14) | ref|XP_002454117.1| | 2e-73 | hypothetical protein SORBIDRAFT_04g024840 [Sorghum bicolor] gb|EES07093.1| hypot |
| JMFF043I04 | Sequence | 655 | 013712 (14) | ref|XP_008235977.1| | 9e-106 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 247 | 013712 (14) | |||
| JMFF050F14 | Sequence | 588 | 013712 (14) | gb|AFK47811.1| | 3e-102 | unknown [Lotus japonicus] | 553 | 013712 (14) | gb|KDO71441.1| | 2e-39 | hypothetical protein CISIN_1g034454mg [Citrus sinensis] |
| JMSF034P02 | Sequence | 647 | 013712 (14) | ref|XP_008235977.1| | 2e-116 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 788 | 013712 (14) | ref|XP_003579972.1| | 3e-68 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l |
Explanatory notes: "*" The opposite end is in another contig. "**" The opposite end is in same contig. "#" The opposite end is singlet. "-" The opposite end has no seqence.
SCORE============================================Contig013712============================================1545 16 --------------------------->JMFF023D14 <---------------------------------------------------rJMFF023D14 41 ----------------------------------------->JMFF043I04 <---------------rJMFF043I04 88 ---------------------------->JMFF040H03 <------------------------------------------------rJMFF040H03 88 ------------------------------>JMFF018I01 <-----------------------------------------------rJMFF018I01 91 ----------------------------------------->JMSF034P02 <--------------------------------------------------rJMSF034P02 273 ---------------------->JMFF007L17 <--------------------------------------------------rJMFF007L17 467 ---------------------------------->JMFF050F14 <-----------------------------------rJMFF050F14
The following clones don't have the opposite end in this pair.