| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF007L17 | Sequence | 549 | 013712 (14) | ref|XP_008235977.1| | 1e-70 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 786 | 013712 (14) | ref|XP_010240027.1| | 5e-60 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l |
| JMFF018I01 | Sequence | 475 | 013712 (14) | ref|XP_010548146.1| | 1e-75 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 757 | 013712 (14) | ref|XP_002454117.1| | 3e-69 | hypothetical protein SORBIDRAFT_04g024840 [Sorghum bicolor] gb|EES07093.1| hypot |
| JMFF023D14 | Sequence | 441 | 013712 (14) | ref|XP_009345931.1| | 4e-57 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 795 | 013712 (14) | ref|XP_002454117.1| | 2e-67 | hypothetical protein SORBIDRAFT_04g024840 [Sorghum bicolor] gb|EES07093.1| hypot |
| JMFF040H03 | Sequence | 441 | 013712 (14) | ref|XP_009345931.1| | 4e-65 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 762 | 013712 (14) | ref|XP_002454117.1| | 2e-73 | hypothetical protein SORBIDRAFT_04g024840 [Sorghum bicolor] gb|EES07093.1| hypot |
| JMFF043I04 | Sequence | 655 | 013712 (14) | ref|XP_008235977.1| | 9e-106 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 247 | 013712 (14) | |||
| JMFF050F14 | Sequence | 588 | 013712 (14) | gb|AFK47811.1| | 3e-102 | unknown [Lotus japonicus] | 553 | 013712 (14) | gb|KDO71441.1| | 2e-39 | hypothetical protein CISIN_1g034454mg [Citrus sinensis] |
| JMSF034P02 | Sequence | 647 | 013712 (14) | ref|XP_008235977.1| | 2e-116 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l | 788 | 013712 (14) | ref|XP_003579972.1| | 3e-68 | PREDICTED: isocitrate dehydrogenase [NAD] regulatory subunit 1, mitochondrial-l |
This contig is upended
. : . : . : . : . : . :
JMFF023D14- ATTCAAATCCACCACGCAGACCTTTCATG
JMFF043I04- GTCAATTATATTCTCCATTCAAATCCACCACGCAGACCTTTCATG
JMSF034P02- ATG
____________________________________________________________
consensus GTCAATTATATTCTCCATTCAAATCCACCACGCAGACCTTTCATG
. : . : . : . : . : . :
JMFF040H03- ACTGAAAAGCTGAACCTCCGAAAGCCACAAACTGAATCCGAAACCTGCTTCAA
JMFF018I01- ACTGAAAAGCTGAACCTCCGAAAGCCACAAACTGAATCCGAAACCTGCTTCAA
JMFF023D14- GCGAATCACTGAAAAGCTGAACCTCCGAAAGCCACAAACTGAATCCGAAACCTGCTTCAA
JMFF043I04- GCGAATCACTGAAAAGCTGAACCTCCGAAAGCCACAAACTGAATCCGAAACCTGCTTCAA
JMSF034P02- GCGAATCACTGAAAAGCTGAACCTCCGAAAGCCACAAACTGAATCCGAAACCTGCTTCAA
____________________________________________________________
consensus GCGAATCACTGAAAAGCTGAACCTCCGAAAGCCACAAACTGAATCCGAAACCTGCTTCAA
. : . : . : . : . : . :
JMFF040H03- TGACTCGAAGATCTTTCCCAATCCTCAAGCAGCTCCTCCAGAAATCAACCGAAAATCCCC
JMFF018I01- TGACTCGAAGATCTTTCCCAATCCTCAAGCAGCTCCTCCAGAAATCAACCGAAAATCCCC
JMFF023D14- TGGCTCGAAGATCTTTCCCAATCCTCAAGCAGCTCCTCCAGAAATCAACCGAAAATCCCC
JMFF043I04- TGGCTCGAAGATCTTTCCCAATCCTCAAGCAGCTCCTCCAGAAATCAACCGAAAATCCCC
JMSF034P02- TGGCTCGAAGATCTTTCCCAATCCTCAAGCAGCTCCTCCAGAAATCAACCGAAAATCCCC
____________________________________________________________
consensus TGGCTCGAAGATCTTTCCCAATCCTCAAGCAGCTCCTCCAGAAATCAACCGAAAATCCCC
. : . : . : . : . : . :
JMFF040H03- AGTCTTTCTTATGCCGATCCGTGACCTACATGTCCCGACCCGGTGACGGCACGCCGCGGC
JMFF018I01- AGTCTTTCTTATGCCGATCCGTGACCTACATGCCCCGACCCGGTGACGGCACGCCGCGGC
JMFF023D14- AGTCTTTCTTATGCCGATCCGTGACCTACATGCCCCGACCCGGTGACGGCACGCCGCGGC
JMFF043I04- AGTCTTTCTTATGCCGATCCGTGACCTACATGCCCCGACCCGGTGACGGCACGCCGCGGC
JMSF034P02- AGTCTTTCTTATGCCGATCCGTGACCTACATGCCCCGACCCGGTGACGGCACGCCGCGGC
____________________________________________________________
consensus AGTCTTTCTTATGCCGATCCGTGACCTACATGCCCCGACCCGGTGACGGCACGCCGCGGC
. : . : . : . : . : . :
JMFF040H03- CCGTAACCCTAATCCCCGGCGATGGAGTCGGGCCTCTGGTGACCAACGCCGTTGAGCAGG
JMFF018I01- CCGTAACCCTAATCCCCGGCGATGGAGTCGGGCCTCTGGTGACCAACGCCGTTGAGCAGG
JMFF023D14- CCGTAACCCTAATCCCCGGCGATGGAGTCGGGCCTCTGGTGACCAACGCCGTTGAGCAGG
JMFF007L17- GGTGACCAACGCCGTTGAGCAGG
JMFF043I04- CCGTAACCCTAATCCCCGGCGATGGAGTCGGGCCTCTGGTGACCAACGCCGTTGAGCAGG
JMSF034P02- CCGTAACCCTAATCCCCGGCGATGGAGTCGGGCCTCTGGTGACCAACGCCGTTGAGCAGG
____________________________________________________________
consensus CCGTAACCCTAATCCCCGGCGATGGAGTCGGGCCTCTGGTGACCAACGCCGTTGAGCAGG
. : . : . : . : . : . :
JMFF040H03- TGATGGACGCGATGCACGCGCCGGTCTACTTCGAGCGCTACGAAGTCCACGGGGATATGA
JMFF018I01- TGATGGACGCGATGCACGCGCCGGTCTACTTCGAGCGCTACGAAGTCCACGGGGATATGA
JMFF023D14- TGATGGACGCGATGCACGCGCCGGTCTACTTCGAGCGCTACGAAGTCCACGGGGATATGA
JMFF007L17- TGATGGACGCGATGCACGCGCCGGTCTACTTCGAGCGCTACGAAGTCCACGGGGATATGA
JMFF043I04- TGATGGACGCGATGCACGCGCCGGTCTACTTCGAGCGCTACGAAGTCCACGGGGATATGA
JMSF034P02- TGATGGACGCGATGCACGCGCCGGTCTACTTCGAGCGCTACGAAGTCCACGGGGATATGA
____________________________________________________________
consensus TGATGGACGCGATGCACGCGCCGGTCTACTTCGAGCGCTACGAAGTCCACGGGGATATGA
. : . : . : . : . : . :
JMFF040H03- AGAGCGTGCCTCCGGAAGTGATCAAGTCGATCCAGAAGAACAAGGTGTGTCTCAAAGGCG
JMFF018I01- AGAGCGTGCCTCCGGAAGTGATCAAGTCGATCCAGAAGAACAAGGTGTGTCTCAAAGGCG
JMFF023D14- AGAGCGTGCCTCCGGAAGTGATCAAGTCGATCCAGAAGAACAAGGTGTGTCTCAAAGGCG
JMFF007L17- AGAGCGTGCCTCCGGAAGTGATCAAGTCGATCCAGAAGAACAAGGTGTGTCTCAAAGGCG
JMFF043I04- AGAGCGTGCCTCCGGAAGTGATCAAGTCGATCCAGAAGAACAAGGTGTGTCTCAAAGGCG
JMSF034P02- AGAGCGTGCCTCCGGAAGTGATCAAGTCGATCCAGAAGAACAAGGTGTGTCTCAAAGGCG
____________________________________________________________
consensus AGAGCGTGCCTCCGGAAGTGATCAAGTCGATCCAGAAGAACAAGGTGTGTCTCAAAGGCG
. : . : . : . : . : . :
JMFF040H03- GCCTCCATACTCCGGTCGGTGGAGGCGTCAGTTCTCTGAACGTCCAGCTGAGGAAGGAGC
JMFF018I01- GCCTCCATACTCCGGTCGGTGGAGGCGTCAGTTCTCTGAACGTCCAGCTGAGGAAGGAGC
JMFF023D14- GCCTCCATACTCCGGTCGGTGGAGGCGTCAGTTCTCTGAACGTCCAGC
JMFF007L17- GCCTCCATACTCCGGTCGGTGGAGGCGTCAGTTCTCTGAACGTCCAGCTGAGGAAGGAGC
JMFF043I04- GCCTCCATACTCCGGTCGGTGGAGGCGTCAGTTCTCTGAACGTCCAGCTGAGGAAGGAGC
JMSF034P02- GCCTCCATACTCCGGTCGGTGGAGGCGTCAGTTCTCTGAACGTCCAGCTGAGGAAGGAGC
JMFF050F14- GCGTCAGTTCTCTGAACGTCCAGCTGAGGAAGGAGC
____________________________________________________________
consensus GCCTCCATACTCCGGTCGGTGGAGGCGTCAGTTCTCTGAACGTCCAGCTGAGGAAGGAGC
. : . : . : . : . : . :
JMFF040H03- TTGATTTGTTCGCTTCCTTGGTGAATTG
JMFF018I01- TTGATTTGTTCGCTTCCTTGGTGAATTGCTTCAACTTGCCAGGGTTGCCGACTCGGCATG
JMFF007L17- TTGATTTGTTCGCTTCCTTGGTGAATTGCTTCAACTTGCCAGGGTTGCCGACTCGGCATG
JMFF043I04- TTGATTTGTTCGCTTCCTTGGTGAATTGCTTCAACTTGCCAGGGTTGCCGACTCGGCATG
JMSF034P02- TTGATTTGTTCGCTTCCTTGGTGAATTGCTTCAACTTGCCAGGGTTGCCGACTCGGCATG
JMFF050F14- TTGATTTGTTCGCTTCCTTGGTGAATTGCTTCAACTTGCCAGGGTTGCCGACTCGGCATG
____________________________________________________________
consensus TTGATTTGTTCGCTTCCTTGGTGAATTGCTTCAACTTGCCAGGGTTGCCGACTCGGCATG
. : . : . : . : . : . :
JMFF018I01- AT
JMFF007L17- ATAACGTGGATATCGTGGTGATTAGGGAGAATACTGAAGGAGAGTACTCAGGGCTCGAGC
JMFF043I04- ATAACGTGGATATCGTGGTGATTAGGGAGAATACTGAAGGAGAGTACTCAGGGCTCGAGC
JMSF034P02- ATAACGTGGATATCGTGGTGATTAGGGAGAATACTGAAGGAGAGTACTCAGGGCTCGAGC
JMFF050F14- ATAACGTGGATATCGTGGTGATTAGGGAGAATACTGAAGGAGAGTACTCAGGGCTCGAGC
____________________________________________________________
consensus ATAACGTGGATATCGTGGTGATTAGGGAGAATACTGAAGGAGAGTACTCAGGGCTCGAGC
. : . : . : . : . : . :
JMFF007L17- ATGAGGTCGTTCCTGGTGTCGTCGAAAGCCTTAAGG
JMFF043I04- ATGAGGTCGTTCCTGGTGTCGTCGAAAGCCTTAAGGTGGATAACAAATTCTGTTCAGAGC
JMSF034P02- ATGAGGTCGTTCCTGGTGTCGTCGAAAGCCTTAAGGTGATAACAAAATTCTGTTCAGAGC
JMFF050F14- ATGAGGTCGTTCCTGGTGTCGTCGAAAGCCTTAAGGTGATAACAAAATTCTGTTCAGAGC
____________________________________________________________
consensus ATGAGGTCGTTCCTGGTGTCGTCGAAAGCCTTAAGGTGATAACAAAATTCTGTTCAGAGC
. : . : . : . : . : . :
JMFF043I04- GCATCGCC
JMSF034P02- GCATCGCCNAGTATGCATTTGAGTATGCTTATCTAAACAACAG
JMFF050F14- GCATCGCCAAGTATGCATTTGAGTATGCTTATCTAAACAACAGAAAGACGGTGACAGCCG
____________________________________________________________
consensus GCATCGCCAAGTATGCATTTGAGTATGCTTATCTAAACAACAGAAAGACGGTGACAGCCG
. : . : . : . : . : . :
JMFF050F14- TGCACAAAGCCAACATTATGAAGCTTGCAGATGGTCTGTTTTTGGAATCATGTAGAGAAG
rJMSF034P02+ GCACAAAGCCAACATTATGAAGCTTGCAGATGGTCTG-TTTTGGAATCATGTAGAGAAG
rJMFF040H03+ GAATCATGTAGAGAAG
rJMFF007L17+ GAATCATGTAGAGAAG
rJMFF023D14+ GAATCATGTAGAGAAG
____________________________________________________________
consensus TGCACAAAGCCAACATTATGAAGCTTGCAGATGGTCTGTTTTTGGAATCATGTAGAGAAG
. : . : . : . : . : . :
JMFF050F14- TTTCCAAGAAGTAT-CCTGGAATTCATTACAATGAAATTATTGTGGATAACTGCTGTATG
rJMSF034P02+ TTTCCCAGAAGTAT-CCTGGAATTCATTACAATGAAATTATTGTGGATAACTGCTGTATG
rJMFF040H03+ TTTCCAAGAAGTAT-CCTGGAATTCATTACAATGAAATTATNGTGGATAACTGCTGTATG
rJMFF007L17+ TTTCCAAGAAGTATCCCTGGAATTCATTACAATGAAATTATTGTGGATAACTGCTGTATG
rJMFF018I01+ TTCCAAGAAGTAT-CCTGGAATTCATTACAATGAAATTATTGTGGATAACTGCTGTATG
rJMFF023D14+ TTTCCAAGAAGTAT-CCTGGAATTCATTACAATGAAATTATTGTGGATAACTGCTGTATG
____________________________________________________________
consensus TTTCCAAGAAGTAT-CCTGGAATTCATTACAATGAAATTATTGTGGATAACTGCTGTATG
. : . : . : . : . : . :
JMFF050F14- CAACTTGTCTCAAAGCCAGAACAATTTGATGTAATGGTGACTCCCAATCTTTATGGAAAT
rJMSF034P02+ CAACTTGTCTCAAAGCCAGAACAATTTGATGTAATGGTGACTCCCAATCTTTATGGAAAT
rJMFF040H03+ CAACTTGTCTCAAAGCCAGAACAATTTGATGTAATGGTGACTCCCAATCTTTATGGAAAT
rJMFF007L17+ CAACTTGTCTCAAAGCCAGAACAATTTGATGTAATGGTGACTCCCAATCTTTATGGAAAT
rJMFF018I01+ CAACTTGTCTCAAAGCCAGAACAATTTGATGTAATGGTGACTCCCAATCTTTATGGAAAT
rJMFF023D14+ CAACTTGTCTCAAAGCCAGAACAATTTGATGTAATGGTGACTCCCAATCTTTATGGAAAT
____________________________________________________________
consensus CAACTTGTCTCAAAGCCAGAACAATTTGATGTAATGGTGACTCCCAATCTTTATGGAAAT
. : . : . : . : . : . :
JMFF050F14- CTGATTGCAAATACAGCTGCTGGTATAGCTGGTGGCACGGGAGTTATGCCTGGCGGCAAT
rJMSF034P02+ CTGATTGCAAATACAGCTGCTGGTATAGCTGGTGGCACGGGAGTTATGCCTGGCGGCAAT
rJMFF040H03+ CTGATTGCAAATACAGCTGCTGGTATAGCTGGTGGCACGGGAGTTATGCCTGACGGCAAT
rJMFF007L17+ CTGATTGCAAATACAGCTGCTGGTATAGCTGGTGGCACGGGAGTTATGCCTGGCGGCAAT
rJMFF018I01+ CTGATTGCAAATACAGCTGCTGGTATAGCTGGTGGCACGGGAGTTATGCCTGACGGCAAT
rJMFF023D14+ CTGATTGCAAATACAGCTGCTGGTATAGCTGGTGGCACGGGAGTTATGCCTGGCGGCAAT
____________________________________________________________
consensus CTGATTGCAAATACAGCTGCTGGTATAGCTGGTGGCACGGGAGTTATGCCTGGCGGCAAT
. : . : . : . : . : . :
JMFF050F14- GTTGGGTCTGATACTGCTGTTTTTGAGCA
rJMSF034P02+ GTTGGGTCTGATACTGCTGTTTTTGAGCAAGGTGCTTCAGCGGGAAATGTTGGCAACCCA
rJMFF040H03+ GTTGGGTCTGATACTGCTGTTTTTGAGCAAGGTGCTTCAGCGGGAAATGTTGGCAACCCA
rJMFF050F14+ GATACTGCTGTTTTTGAGCAAGGTGCTTCAGCGGGAAATGTTGGCAACCCA
rJMFF007L17+ GTTGGGTCTGATACTGCTGTTTTTGAGCAAGGTGCTTCAGCGGGAAATGTTGGCAACCCA
rJMFF018I01+ GTTGGGTCTGATACTGCTGTTTTTGAGCAAGGTGCTTCAGCGGGAAATGTTGGCAACCCA
rJMFF023D14+ GTTGGGTCTGATACTGCTGTTTTTGAGCAAGGTGCTTCAGCGGGAAATGTTGGCAACCCA
____________________________________________________________
consensus GTTGGGTCTGATACTGCTGTTTTTGAGCAAGGTGCTTCAGCGGGAAATGTTGGCAACCCA
. : . : . : . : . : . :
rJMSF034P02+ AACCTGGTTGAGCAGAAAAGAGCAAATCCAGTGGCACTTCTCCTCTCATCAGCGATGATG
rJMFF040H03+ AACCTGGTTGAGCAGAAAAGAGCAAATCCAGTGGCACTTCTCCTCTCATCAGCGATGATG
rJMFF050F14+ AACCTGGTTGAGCAGAAAAGAGCAAATCCAGTGGCACTTCTCCTCTCATCAGCGATGATG
rJMFF007L17+ AACCTGGTTGAGCAGAAAAGAGCAAATCCAGTGGCACTTCTCCTCTCATCAGCGATGATG
rJMFF018I01+ AACCTGGTTGAGCAGAAAAGAGCAAATCCAGTGGCACTTCTCCTCTCATCAGCGATGATG
rJMFF023D14+ AACCTGGTTGAGCAGAAAAGAGCAAATCCAGTGGCACTTCTCCTCTCATCAGCGATGATG
____________________________________________________________
consensus AACCTGGTTGAGCAGAAAAGAGCAAATCCAGTGGCACTTCTCCTCTCATCAGCGATGATG
. : . : . : . : . : . :
rJMSF034P02+ CTTAGACATCTCCAATTTCCATCATTTGCTGATCGGTTAGAAACTGCAGTGAAACGTGTT
rJMFF040H03+ CTTAGACATCTCCAATTTCCATCATTTGCTGATCGGTTAGAAACTGCAGTGAAACGTGTT
rJMFF050F14+ CTTAGACATCTCCAATTTCCATCATTTGCTGATCGGTTAGAAACTGCAGTGAAACGTGTT
rJMFF007L17+ CTTAGACATCTCCAATTTCCATCATTTGCTGATCGGTTAGAAACTGCAGTGAAACGTGTT
rJMFF018I01+ CTTAGACATCTCCAATTTCCATCATTTGCTGATCGGTTAGAAACTGCAGTGAAACGTGTT
rJMFF023D14+ CTTAGACATCTCCAATTTCCATCATTTGCTGATCGGTTAGAAACTGCAGTGAAACGTGTT
____________________________________________________________
consensus CTTAGACATCTCCAATTTCCATCATTTGCTGATCGGTTAGAAACTGCAGTGAAACGTGTT
. : . : . : . : . : . :
rJMSF034P02+ ATAGCTGAAGGCAAGTACAGGACAAAGGACCTAGGAGGAGAAAGTACGACCCAAGAAGTC
rJMFF040H03+ ATAGCTGAAGGCAAGTACAGGACAAAGGACCTAGGAGGAGAAAGTACGACCCAAGAAGTC
rJMFF050F14+ ATAGCTGAAGGCAAGTACAGGACAAAGGACCTAGGAGGAGAAAGTACGACCCAAGAAGTC
rJMFF007L17+ ATAGCTGAAGGCAAGTACAGGACAAAGGACCTAGGAGGAGAAAGTACGACCCAAGAAGTC
rJMFF018I01+ ATAGCTGAAGGCAAGTACAGGACAAAGGACCTAGGAGGAGAAAGTACGACCCAAGAAGTC
rJMFF023D14+ ATAGCTGAAGGCAAGTACAGGACAAAGGACCTAGGAGGAGAAAGTACGACCCAAGAAGTC
____________________________________________________________
consensus ATAGCTGAAGGCAAGTACAGGACAAAGGACCTAGGAGGAGAAAGTACGACCCAAGAAGTC
. : . : . : . : . : . :
rJMSF034P02+ GTGGATGCAGTTTTAGCTGCGCTTGACTAGTTGTCATTGCTGCTAGTCTGCAGAATTCAT
rJMFF040H03+ GTGGATGCAGTTTTAGCTGCGCTTGACTAATTGTCATTGCTGCTAGTCTGCAGAATTCAT
rJMFF050F14+ GTGGATGCAGTTTTAGCTGCGCTTGACTAATTGTCATTGCTGCTAGTCTGCAGAATTCAT
rJMFF007L17+ GTGGATGCAGTTTTAGCTGCGCTTGACTAATTGTCATTGCTGCTAGTCTGCAGAATTCAT
rJMFF018I01+ GTGGATGCAGTTTTAGCTGCGCTTGACTAATTGTCATTGCTGCTAGTCTGCAGAATTCAT
rJMFF023D14+ GTGGATGCAGTTTTAGCTGCGCTTGACTAATTGTCATTGCTGCTAGTCTGCAGAATTCAT
____________________________________________________________
consensus GTGGATGCAGTTTTAGCTGCGCTTGACTAATTGTCATTGCTGCTAGTCTGCAGAATTCAT
. : . : . : . : . : . :
rJMSF034P02+ TATTGAGATCAAGTTCAGATTCAGCTGGCCAATTTTTCTGCATAATAAGTTTGATTACAC
rJMFF040H03+ TATTGAGATCAAGTTCAGATTCAGCTGGCCAATTTTTCTGCATAATAAGTTTGATTACAC
rJMFF043I04+ TTCAGATTCAGCTGGCCAATTTTTTTGCATAATAAGTTTGATTACAC
rJMFF050F14+ TATTGAGATCAAGTTCAGATTCAGCTGGCCAATTTTTCTGCATAATAAGTTTGATTACAC
rJMFF007L17+ TATTGAGATCAAGTTCAGATTCAGCTGGCCAATTTTTCTGCATAATAAGTTTGATTACAC
rJMFF018I01+ TATTGAGATCAAGTTCAGATTCAGCTGGCCAATTTTTCTGCATAATAAGTTTGATTACAC
rJMFF023D14+ TATTGAGATCAAGTTCAGATTCAGCTGGCCAATTTTTCTGCATAATAAGTTTGATTACAC
____________________________________________________________
consensus TATTGAGATCAAGTTCAGATTCAGCTGGCCAATTTTTCTGCATAATAAGTTTGATTACAC
. : . : . : . : . : . :
rJMSF034P02+ TCTGTTTGCCTTCTCCCAATGTTTTTATTTATTTTTGTTTCCACCAACTACTTACATATT
rJMFF040H03+ TCTGTTTGCCTTNTCCCAATGTTTTTATTTATTTTTGTTTCCACCAACTACTTACATATT
rJMFF043I04+ TCTGTTTGCCTTTTCCCAATGTTTTTATTTATTTTTGTTTCCCCCAACTACTTACATATT
rJMFF050F14+ TCTGTTTGCCTTCTCCCAATGTTTTTATTTATTTTTGTTTCCACCAACTACTTACATATT
rJMFF007L17+ TCTGTTTGCCTTCTCCCAATGTTTTTATTTATTTTTGTTTCCACCAACTACTTACATATT
rJMFF018I01+ TCTGTTTGCCTTCTCCCAATGTTTTTATTTATTTTTGTTTCCACCAACTACTTACATATT
rJMFF023D14+ TCTGTTTGCCTTCTCCCAATGTTTTTATTTATTTTTGTTTCCACCAACTACTTACATATT
____________________________________________________________
consensus TCTGTTTGCCTTCTCCCAATGTTTTTATTTATTTTTGTTTCCACCAACTACTTACATATT
. : . : . : . : . : . :
rJMSF034P02+ CCTTTGGTGTTTTAGATTAATAATTCACAAGAGTTAAGAATGCTCTGTTATAATATACAT
rJMFF040H03+ CCTTTGGTGTTTTAGATTAATAATTCACAAGAGTTAAGAATGCTCTGTTATAATATACAT
rJMFF043I04+ CCTTTGGTGTTTTAGATTAATAATTCCCAAGAGTTAAGAATGCTCTGTTATAATATACAT
rJMFF050F14+ CCTTTGGTGTTTTAGATTAATAATTCACAAGAGTTAAGAATGCTCTGTTATAATATACAT
rJMFF007L17+ CCTTTGGTGTTTTAGATTAATAATTCACAAGAGTTAAGAATGCTCTGTTATAATATACAT
rJMFF018I01+ CCTTTGGTGTTTTAGATTAATAATTCACAAGAGTTAAGAATGCTCTGTTATAATATACAT
rJMFF023D14+ CCTTTGGTGTTTTAGATTAATAATTCACAAGAGTTAAGAATGCTCTGTTATAATATACAT
____________________________________________________________
consensus CCTTTGGTGTTTTAGATTAATAATTCACAAGAGTTAAGAATGCTCTGTTATAATATACAT
. : . : . : . : . : . :
rJMSF034P02+ TCTTACAGTTTTGCGATTTAACTTATTGTGAATGTAATTTACACTCAGGCAAGTGTAATT
rJMFF040H03+ TCTTACAGTTTTGCGATTTAACTTATTGTGAATGTAATTTACACTCAGGCAAGTGTAATT
rJMFF043I04+ TTTTACAGTTTTGCGATTTAACTTATTGGGAATGTAATTTCCCCTCAGGCAAGTGTAATT
rJMFF050F14+ TCTTACAGTTTTGCGATTTAACTTATTGTGAATGTAATTTACACTCAGGCAAGTGTAATT
rJMFF007L17+ TCTTACAGTTTTGCGATTTAACTTATTGTGAATGTAATTTACACTCAGGCAAGTGTAATT
rJMFF018I01+ TCTTACAGTTTTGCGATTTAACTTATTGTGAATGTAATTTACACTCAGGCAAGTGTAATT
rJMFF023D14+ TCTTACAGTTTTGCGATTTAACTTATTGTGAATGTAATTTACACTCAGGCAAGTGTAATT
____________________________________________________________
consensus TCTTACAGTTTTGCGATTTAACTTATTGTGAATGTAATTTACACTCAGGCAAGTGTAATT
. : . : . : . : . : . :
rJMSF034P02+ CGAGGGATCTT
rJMFF040H03+ CGAGGGATCTTATCCTTTTCACAA
rJMFF043I04+ GGAGGGATTTTATCCTTTTC
rJMFF050F14+ CGAGGGATCTTATCCTTTTCAC
rJMFF007L17+ CGAGGGATCTTATCCTTTTCACAACAATCTTCTTGAATTATAGTACAGC
rJMFF018I01+ CGAGGGATCTTATCCTTTTCACAA
rJMFF023D14+ CGAGGGATCTTATCCTTTTCACAACAATCTTCTTGAATTATAGTACAGCCTTGATAGACT
____________________________________________________________
consensus CGAGGGATCTTATCCTTTTCACAACAATCTTCTTGAATTATAGTACAGCCTTGATAGACT