clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFS053C05 | Sequence | 597 | 008039 (7) | ref|XP_006346768.1| | 2e-40 | PREDICTED: uncharacterized membrane protein At1g16860-like [Solanum tuberosum] | |||||
JMSF029I15 | Sequence | 652 | 008039 (7) | ref|XP_004236674.1| | 2e-40 | PREDICTED: uncharacterized membrane protein At1g16860-like [Solanum lycopersicu | 725 | 008039 (7) | ref|XP_009783871.1| | 2e-83 | PREDICTED: uncharacterized membrane protein At1g16860-like [Nicotiana sylvestri |
JMSF042F18 | Sequence | 777 | 008039 (7) | ref|XP_006346768.1| | 4e-72 | PREDICTED: uncharacterized membrane protein At1g16860-like [Solanum tuberosum] | 814 | 008039 (7) | ref|XP_009783871.1| | 1e-94 | PREDICTED: uncharacterized membrane protein At1g16860-like [Nicotiana sylvestri |
JMSF044F13 | Sequence | 817 | 008039 (7) | ref|XP_004236674.1| | 4e-72 | PREDICTED: uncharacterized membrane protein At1g16860-like [Solanum lycopersicu | 835 | 008039 (7) | ref|XP_009783871.1| | 8e-93 | PREDICTED: uncharacterized membrane protein At1g16860-like [Nicotiana sylvestri |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008039============================================1550 1 ---------------------------------------------------->JMSF044F13 <-----------------------------------------------------rJMSF044F13 49 ------------------------------------------------->JMSF042F18 <---------------------------------------------------rJMSF042F18 58 ----------------------------------------->JMSF029I15 <----------------------------------------------rJMSF029I15
The following clones don't have the opposite end in this pair.
-------------------------------------->JMFS053C05-