clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF011C18 | Sequence | 546 | 012846 (7) | ref|XP_009599172.1| | 5e-44 | PREDICTED: 50S ribosomal protein L11, chloroplastic [Nicotiana tomentosiformis] | 755 | 012846 (7) | ref|XP_009758554.1| | 1e-88 | PREDICTED: 50S ribosomal protein L11, chloroplastic [Nicotiana sylvestris] |
JMFF012F21 | Sequence | 470 | 012846 (7) | ref|XP_009599172.1| | 8e-37 | PREDICTED: 50S ribosomal protein L11, chloroplastic [Nicotiana tomentosiformis] | 714 | 012846 (7) | ref|XP_009348693.1| | 1e-86 | PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Pyrus x bretschneider |
JMFN043C02 | Sequence | 558 | 012846 (7) | ref|XP_009348693.1| | 4e-86 | PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Pyrus x bretschneider | |||||
JMSF044B13 | Sequence | 503 | 012846 (7) | ref|XP_009599172.1| | 1e-43 | PREDICTED: 50S ribosomal protein L11, chloroplastic [Nicotiana tomentosiformis] | 642 | 012846 (7) | ref|XP_009348693.1| | 3e-91 | PREDICTED: 50S ribosomal protein L11, chloroplastic-like [Pyrus x bretschneider |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012846============================================ 951 26 -------------------------------------------------------->JMFF011C18 <------------------------------------------------------------------------------rJMFF011C18 43 ---------------------------------------------------->JMSF044B13 <-----------------------------------------------------------------rJMSF044B13 68 ------------------------------------------------>JMFF012F21 <--------------------------------------------------------------------------rJMFF012F21
The following clones don't have the opposite end in this pair.
---------------------------------------------------------->JMFN043C02-