clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF026P18 | Sequence | 451 | 009749 (8) | gb|ACL78792.1| | 1e-38 | thylakoid-bound ascorbate peroxidase [Solanum lycopersicum] | 767 | 009749 (8) | gb|AAY89389.1| | 5e-80 | thylakoid-bound ascorbate peroxidase 6 [Solanum lycopersicum] gb|ABA10746.1| thy |
JMFF036H21 | Sequence | 586 | 009749 (8) | gb|ACL78792.1| | 2e-72 | thylakoid-bound ascorbate peroxidase [Solanum lycopersicum] | 718 | 009749 (8) | gb|AAY89389.1| | 2e-55 | thylakoid-bound ascorbate peroxidase 6 [Solanum lycopersicum] gb|ABA10746.1| thy |
JMFF038B04 | Sequence | 565 | 009749 (8) | gb|ACL78792.1| | 9e-68 | thylakoid-bound ascorbate peroxidase [Solanum lycopersicum] | 743 | 009749 (8) | gb|AAY89389.1| | 4e-62 | thylakoid-bound ascorbate peroxidase 6 [Solanum lycopersicum] gb|ABA10746.1| thy |
JMSF049M17 | Sequence | 708 | 009749 (8) | gb|ACL78792.1| | 8e-96 | thylakoid-bound ascorbate peroxidase [Solanum lycopersicum] | 712 | 009749 (8) | ref|XP_004250391.1| | 1e-147 | PREDICTED: probable L-ascorbate peroxidase 6, chloroplastic [Solanum lycopersic |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009749============================================1573 4 ----------------------------------->JMFF038B04 <----------------------------------------------rJMFF038B04 5 ------------------------------------>JMFF036H21 <---------------------------------------------rJMFF036H21 45 --------------------------->JMFF026P18 <------------------------------------------------rJMFF026P18 409 ------------------------------------------->JMSF049M17 <--------------------------------rJMSF049M17
The following clones don't have the opposite end in this pair.