clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF013A11 | Sequence | 465 | 003112 (12) | ref|XP_009596806.1| | 147 | PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis] | 769 | 003112 (12) | ref|XP_009800507.1| | 245 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] |
JMFN003K06 | Sequence | 627 | 003112 (12) | ref|XP_009800507.1| | 252 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] | |||||
JMFN007P09 | Sequence | 480 | 003112 (12) | ref|XP_009800507.1| | 146 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] | |||||
JMFN017F21 | Sequence | 633 | 003112 (12) | ref|XP_009800507.1| | 235 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] | |||||
JMFN019A01 | Sequence | 618 | 003112 (12) | ref|XP_009800507.1| | 234 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] | |||||
JMSF014G04 | Sequence | 249 | 003112 (12) | ref|XP_008459729.1| | 51.6 | PREDICTED: uncharacterized protein LOC103498768 [Cucumis melo] | 766 | 003112 (12) | ref|XP_009800507.1| | 278 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] |
JMSF027A09 | Sequence | 676 | 003112 (12) | ref|XP_009800507.1| | 241 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] | 747 | 003112 (12) | ref|XP_009800507.1| | 276 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] |
JMSF034A05 | Sequence | 676 | 003112 (12) | ref|XP_009800507.1| | 186 | PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris] | 702 | 003112 (12) | gb|EYU28344.1| | 2e-46 | hypothetical protein MIMGU_mgv1a011594mg [Erythranthe guttata] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig003112============================================ 927 48 ------------------------------------------------->JMFF013A11 <-------------------------------------------------------------------------------rJMFF013A11 53 -------------------------->JMSF014G04 <----------------------------------------------------------------------------------rJMSF014G04 53 ------------------------------------------------------------------------>JMSF034A05 <---------------------------------------------------------------------------rJMSF034A05 71 ------------------------------------------------------------------------>JMSF027A09 <-------------------------------------------------------------------------------rJMSF027A09
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------->JMFN017F21- ------------------------------------------------------------------->JMFN003K06- ------------------------------------------------------------------>JMFN019A01- --------------------------------------------------->JMFN007P09-