Contig 003112:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013A11Sequence465003112 (12)ref|XP_009596806.1|147PREDICTED: uncharacterized protein LOC104092833 [Nicotiana tomentosiformis]769003112 (12)ref|XP_009800507.1|245PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]
JMFN003K06Sequence627003112 (12)ref|XP_009800507.1|252PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]
JMFN007P09Sequence480003112 (12)ref|XP_009800507.1|146PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]
JMFN017F21Sequence633003112 (12)ref|XP_009800507.1|235PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]
JMFN019A01Sequence618003112 (12)ref|XP_009800507.1|234PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]
JMSF014G04Sequence249003112 (12)ref|XP_008459729.1|51.6PREDICTED: uncharacterized protein LOC103498768 [Cucumis melo]766003112 (12)ref|XP_009800507.1|278PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]
JMSF027A09Sequence676003112 (12)ref|XP_009800507.1|241PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]747003112 (12)ref|XP_009800507.1|276PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]
JMSF034A05Sequence676003112 (12)ref|XP_009800507.1|186PREDICTED: uncharacterized protein LOC104246394 [Nicotiana sylvestris]702003112 (12)gb|EYU28344.1|2e-46hypothetical protein MIMGU_mgv1a011594mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFN007P09+                                            GGAAAATTTGCAGTCTTGGATTGATAG
                      ____________________________________________________________
consensus                                              GGAAAATTTGCAGTCTTGGATTGATAG
 
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JMFN007P09+           TGTATCAAACTGTTTCTTGCAATAGTGGATCAGGAATAAGGAAACAACATTATTCTGTAA
rJMFF013A11-                               ATAGTGGATCAGGAATAAGGAAACAACATTATTCTGTAA
rJMSF027A09-                                                 GGAAACAACATTATTCTGTAA
rJMSF034A05-                               ATAGTGGATCAGGAATAAGGAAACAACATTATTCTGTAA
rJMSF014G04-                               ATAGTGGATCAGGAATAAGGAAACAACATTATTCTGTAA
                      ____________________________________________________________
consensus             TGTATCAAACTGTTTCTTGCAATAGTGGATCAGGAATAAGGAAACAACATTATTCTGTAA
 
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JMFN007P09+           CAAATACACATTCGAAAAGTCCATTACTCCATTACAGAAGCAGCAAAGTAAGATGAAGCC
rJMFF013A11-          CAAATACACATTCGAAAAGTCCATTACTCCATTACAGAAGCAGCAAAGTAAGATGAAGCC
rJMSF027A09-          CAAATACACATTCGAAAAGTCCATTACTCCATTACAGAAGCAGCAAAGTAAGATGAAGCC
rJMSF034A05-          CAAATACACATTCGAAAAGTCCATTACTCCATTATAGAAGCAGCAAAGTAAGATGAAGCC
rJMSF014G04-          CAAATACACATTCGAAAAGTCCATTACTCCATTACAGAAGCAGCAAAGTAAGATGAAGCC
                      ____________________________________________________________
consensus             CAAATACACATTCGAAAAGTCCATTACTCCATTACAGAAGCAGCAAAGTAAGATGAAGCC
 
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JMFN007P09+           TCAGAGATTAGCAGATTGTTCCGCCGGAACGGCGAAATCCACCGCCAATACGTCATCGAG
rJMFF013A11-          TCAGAGATTAGCAGATTGTTCCGCCGGAACGGCGAAATCCACCGCCAATACGTCATCGAG
rJMSF027A09-          TCAGAGATTAGCAGATTGTTCCGCCGGAACGGCGAAATCCACCGCCAATACGTCATCGAG
rJMSF034A05-          TCAGAGATTAGCAGATTGTTCCGCCGGAACGGCGAAATCCACCGCCAATACGTCATCGAG
rJMSF014G04-          TCAGAGATTAGCAGATTGTTCCGCCGGAACGGCGAAATCCACCGCCAATACGTCATCGAG
                      ____________________________________________________________
consensus             TCAGAGATTAGCAGATTGTTCCGCCGGAACGGCGAAATCCACCGCCAATACGTCATCGAG
 
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JMFN007P09+           AAACTCCTCAACCGTATCCTTCGCCTCATTCAACGTCTCCAATTCACTCACTCCTCGGAC
rJMFF013A11-          AAACTCCTCAACCGTATCCTTCGCCTCATTCAACGTCTCCAATTCACTCACTCCTCGGAC
rJMSF027A09-          AAACTCCTCAACCGTATCCTTCGCCTCATTCAACGTCTCCAATTCACTCACTCCTCGGAC
rJMSF034A05-          AAACTCCTCAACCGTATCCTTCGCCTCATTCAACGTCTCCAATTCACTCACTCCTCGGAC
rJMSF014G04-          AAACTCCTCAACCGTATCCTTCGCCTCATTCAACGTCTCCAATTCACTCACTCCTCGGAC
JMFN003K06+                                       TTCAACGTCTCCAATTCACTCACTCCTCGGAC
JMSF034A05+                                                   AATTCACTCACTCNTCGGAC
JMSF027A09+                                                    ATTCACTCACTCNTCGGAC
                      ____________________________________________________________
consensus             AAACTCCTCAACCGTATCCTTCGCCTCATTCAACGTCTCCAATTCACTCACTCCTCGGAC
 
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JMFN007P09+           AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
rJMFF013A11-          AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
rJMSF027A09-          AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
rJMSF034A05-          AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
rJMSF014G04-          AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
JMFN003K06+           AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
JMSF034A05+           AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
JMFN019A01+                  ATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
JMFN017F21+                  ATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
JMSF027A09+           AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
                      ____________________________________________________________
consensus             AACCGCAATCGAACCGATCGAATAACCTTTCGCCCTGGCGGGAGAGAAGTTTTCCCCAAC
 
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JMFN007P09+           GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
rJMFF013A11-          GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
rJMSF027A09-          GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
rJMSF034A05-          GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCA-CCTCAGGACTTC
rJMSF014G04-          GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
JMFN003K06+           GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
JMSF034A05+           GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCA-CCTCAGGACTTC
JMFN019A01+           GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
JMFN017F21+           GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
JMSF027A09+           GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
                      ____________________________________________________________
consensus             GCACAGCTGTTCAATCGAAGGGAATTTCTCTTTAATTCCCTTGTTCACCCTCAGGACTTC
 
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JMFN007P09+           GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
rJMFF013A11-          GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
rJMSF027A09-          GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
rJMSF034A05-          GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
rJMSF014G04-          GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
JMFN003K06+           GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
JMSF034A05+           GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
JMFN019A01+           GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
JMFN017F21+           GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
JMSF027A09+           GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
                      ____________________________________________________________
consensus             GTTTTTCTCGTTTTCCCCAACGCTTTCCTTCAATTTCAGAAACGTAGCCCTAATGGCGGA
 
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JMFN007P09+           ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCA                           
rJMFF013A11-          ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
rJMSF027A09-          ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
rJMSF034A05-          ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
rJMSF014G04-          ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
JMFN003K06+           ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
JMSF034A05+           ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
JMFN019A01+           ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
JMFN017F21+           ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
JMSF027A09+           ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
JMFF013A11+                         TAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
                      ____________________________________________________________
consensus             ACCGGCCGGCACCTTAATCGGGCCGGAGAAGCAATCGGGGATCCAGTCCACGGCCATGAT
 
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rJMFF013A11-          GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
rJMSF027A09-          GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
rJMSF034A05-          GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
rJMSF014G04-          GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
JMFN003K06+           GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
JMSF034A05+           GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
JMFN019A01+           GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
JMFN017F21+           GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
JMSF027A09+           GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
JMFF013A11+           GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
                      ____________________________________________________________
consensus             GTCTTCGCAGATCGGAAGGACGTATCCCTTGACGACGGCCACGTGGTCGGGGTGTGCGGA
 
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rJMFF013A11-          GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
rJMSF027A09-          GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
rJMSF034A05-          GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
rJMSF014G04-          GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
JMFN003K06+           GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
JMSF034A05+           GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
JMFN019A01+           GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
JMFN017F21+           GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
JMSF027A09+           GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
JMFF013A11+           GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
                      ____________________________________________________________
consensus             GTAGTCGGCGAGGTCGGACTTGGACCTGTACCGACAGTGGAGCATGTGAGTGAAGGAGAG
 
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rJMFF013A11-          AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
rJMSF027A09-          AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
rJMSF034A05-          AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
rJMSF014G04-          AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
JMFN003K06+           AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
JMSF034A05+           AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
JMFN019A01+           AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
JMFN017F21+           AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
JMSF027A09+           AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
JMSF014G04+                                                           CTGGGGCAGAGA
JMFF013A11+           AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
                      ____________________________________________________________
consensus             AGAGGAGGATCTGGCGCGGAGGAGTGCGCCGGCGGCGATGTGGGCCACCTGGGGCAGAGA
 
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rJMFF013A11-          ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCGCCGGCTTCGACGTCGGGCT
rJMSF027A09-          ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
rJMSF034A05-          ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
rJMSF014G04-          ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
JMFN003K06+           ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
JMSF034A05+           ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
JMFN019A01+           ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
JMFN017F21+           ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
JMSF027A09+           ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
JMSF014G04+           ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
JMFF013A11+           ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
                      ____________________________________________________________
consensus             ACCAAGGCCGTTGAGCTTGCCGATCATGTCGTTGACCTTCG-CGGCTTCGACGTCGGGCT
 
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rJMFF013A11-          TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGG                     
rJMSF027A09-          TCACTTTGAAGAGAAAGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
rJMSF034A05-          TCAC                                                        
rJMSF014G04-          TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
JMFN003K06+           TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
JMSF034A05+           TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
JMFN019A01+           TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
JMFN017F21+           TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
JMSF027A09+           TCACTTTGAAGAGAAAGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
JMSF014G04+           TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
JMFF013A11+           TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
                      ____________________________________________________________
consensus             TCACTTTGAAGAGAACGACGTGCTCGACGATTTGACTGGTTGACATTCCGATCGGCGCGG
 
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rJMSF027A09-          TGGA                                                        
rJMSF014G04-          TGGAGTA                                                     
JMFN003K06+           TGGAGTAGCAGCGGCGGAAGGCGGAGGAGGCGGCTGCCTGAGATAGAGATAATGCG    
JMSF034A05+           TGGAGTAGCAGCGGCGGAAGGCGGAGGAGGCGGCTGCCTGAGATAGAGATAATGCGCGTG
JMFN019A01+           TGGAGTAGCAGCGGCGGAAGGCGGAGGAGGCGGCTGCCTGAGATAGAGATAATGCGCGTG
JMFN017F21+           TGGAGTAGCAGCGGCGGAAGGCGGAGGAGGCGGCTGCCTGAGATAGAGATAATGCGCGTG
JMSF027A09+           TGGAGTAGCAGCGGCGGAAGGCGGAGGAGGCGGCTGCCTGAGATAGAGATAATGCGCGTG
JMSF014G04+           TGGAGTAGCAGCGGCGGAAGGCGGAGGAGGCGGCTGCCTGAGATAGAGATAATGCGCGTG
JMFF013A11+           TGGAGTAGCAGCGGCGGAAGGCGGAGGAGGCGGCTGCCTGAGATAGAGATAATGCGCGTG
                      ____________________________________________________________
consensus             TGGAGTAGCAGCGGCGGAAGGCGGAGGAGGCGGCTGCCTGAGATAGAGATAATGCGCGTG
 
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JMSF034A05+           GGGATAACAATTGCGAGCGATATTGAGCTGCTGCTTTCGCAATGAGCATTTTTCC     
JMFN019A01+           GGGATAACAATTGCGAGCGATATTGA                                  
JMFN017F21+           GGGATAACAATTGCGAGCGATATTGAGCTGCTGCTTTCGCA                   
JMSF027A09+           GGGATAACAATTGCGAGCGATATTGAGCTGCTGCTTTCGCAATGAGCATTTTTCC     
JMSF014G04+           GGGATAACAATTGCGAGCGATATTGAGCTGCTGCTTTCGCAATGAGCATTTTTCC     
JMFF013A11+           GGGATAACAATTGCGAGCGATATTGAGCTGCTGCTTTCGCAATGAGCATTTTTCCTTGCA
                      ____________________________________________________________
consensus             GGGATAACAATTGCGAGCGATATTGAGCTGCTGCTTTCGCAATGAGCATTTTTCCTTGCA