clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015I18 | Sequence | 692 | 007355 (9) | emb|CDP18233.1| | 9e-93 | unnamed protein product [Coffea canephora] | |||||
JMFF019O03 | Sequence | 595 | 007355 (9) | gb|KJB22498.1| | 8e-62 | hypothetical protein B456_004G050500 [Gossypium raimondii] | 749 | 007355 (9) | emb|CDP18233.1| | 2e-119 | unnamed protein product [Coffea canephora] |
JMFF031L19 | Sequence | 565 | 007355 (9) | gb|KJB22498.1| | 3e-60 | hypothetical protein B456_004G050500 [Gossypium raimondii] | 640 | 007355 (9) | emb|CDP18233.1| | 2e-99 | unnamed protein product [Coffea canephora] |
JMFN003N22 | Sequence | 616 | 007355 (9) | gb|KJB22498.1| | 5e-75 | hypothetical protein B456_004G050500 [Gossypium raimondii] | |||||
JMFN016J20 | Sequence | 625 | 007355 (9) | gb|KJB22498.1| | 2e-81 | hypothetical protein B456_004G050500 [Gossypium raimondii] | |||||
JMSF051D17 | Sequence | 695 | 007355 (9) | ref|XP_011087486.1| | 2e-93 | PREDICTED: GTP-binding protein SAR1A-like [Sesamum indicum] | 750 | 007355 (9) | emb|CDP18233.1| | 2e-119 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig007355============================================ 900 6 ---------------------------------------------------------------------------->JMSF051D17 <----------------------------------------------------------------------------------rJMSF051D17 108 ----------------------------------------------------------------->JMFF019O03 <-------------------------------------------------------------------rJMFF019O03 113 ------------------------------------------------------------->JMFF031L19 <-------------------------------------------------------rJMFF031L19
The following clones don't have the opposite end in this pair.
<----------------------------------------------------rJMFF015I18- -------------------------------------------------------------------->JMFN003N22- ------------------------------------------------------------------->JMFN016J20-