| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF015I18 | Sequence | 692 | 007355 (9) | emb|CDP18233.1| | 9e-93 | unnamed protein product [Coffea canephora] | |||||
| JMFF019O03 | Sequence | 595 | 007355 (9) | gb|KJB22498.1| | 8e-62 | hypothetical protein B456_004G050500 [Gossypium raimondii] | 749 | 007355 (9) | emb|CDP18233.1| | 2e-119 | unnamed protein product [Coffea canephora] |
| JMFF031L19 | Sequence | 565 | 007355 (9) | gb|KJB22498.1| | 3e-60 | hypothetical protein B456_004G050500 [Gossypium raimondii] | 640 | 007355 (9) | emb|CDP18233.1| | 2e-99 | unnamed protein product [Coffea canephora] |
| JMFN003N22 | Sequence | 616 | 007355 (9) | gb|KJB22498.1| | 5e-75 | hypothetical protein B456_004G050500 [Gossypium raimondii] | |||||
| JMFN016J20 | Sequence | 625 | 007355 (9) | gb|KJB22498.1| | 2e-81 | hypothetical protein B456_004G050500 [Gossypium raimondii] | |||||
| JMSF051D17 | Sequence | 695 | 007355 (9) | ref|XP_011087486.1| | 2e-93 | PREDICTED: GTP-binding protein SAR1A-like [Sesamum indicum] | 750 | 007355 (9) | emb|CDP18233.1| | 2e-119 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF051D17- ACAGAGAGAGATATCCAGCAGCGCTTTCAACAGACATGTGTCCAACTCTAAGTCCAGTAA
____________________________________________________________
consensus ACAGAGAGAGATATCCAGCAGCGCTTTCAACAGACATGTGTCCAACTCTAAGTCCAGTAA
. : . : . : . : . : . :
rJMFF019O03- TACTTTATGTAT
rJMFF031L19- TACTTTATGTAT
rJMFF015I18- TACTTTATGTAT
rJMSF051D17- AGAAAAACAGAACAGAAAACAGAATAACAGAGAATCTCACTGCCTAATTACTTTATGTAT
____________________________________________________________
consensus AGAAAAACAGAACAGAAAACAGAATAACAGAGAATCTCACTGCCTAATTACTTTATGTAT
. : . : . : . : . : . :
rJMFF019O03- TGAGACATCCATTTGAAGCCTTCTCCATAACCCATCTTGCGGACTATGCTGCACATGAAT
rJMFF031L19- TGAGACATCCATTTGAAGCCTTCTCCATAACCCATCTTGCGGACTATGCTGCACATGAAT
rJMFF015I18- TGAGACATCCATTTGAAGCCTTCTCCATAACCCATCTTGCGGACTATGCTGCACATGAAT
rJMSF051D17- TGAGACATCCATTTGAAGCCTTCTCCATAACCCATCTTGCGGACTATGCTGCACATGAAT
____________________________________________________________
consensus TGAGACATCCATTTGAAGCCTTCTCCATAACCCATCTTGCGGACTATGCTGCACATGAAT
. : . : . : . : . : . :
rJMFF019O03- ACCTCGAGAGGGCGAACATTGGAATCTGCCAGGTTCACCTTTCCCTTGCCAGTGGTGATG
rJMFF031L19- ACCTCGAGAGGGCGAACATTGGAATCTGCCAGGTTCACCTTTCCCTTGCCAGTGGTGATG
rJMFF015I18- ACCTCGAGAGGGCGAACATTGGAATCTGCCAGGTTCACCTTTCCCTTGCCAGTGGTGATG
rJMSF051D17- ACCTCGAGAGGGCGAACATTGGAATCTGCCAGGTTCACCTTTCCCTTGCCAGTGGTGATG
JMSF051D17+ ATCTGCCAGGTTCACCTTTCCCTTGCCAGTGGTGATG
____________________________________________________________
consensus ACCTCGAGAGGGCGAACATTGGAATCTGCCAGGTTCACCTTTCCCTTGCCAGTGGTGATG
. : . : . : . : . : . :
rJMFF019O03- CCTGTCAACCCCATGTGGTAACGCAATTCATCTTCAGAAGCAGCATATGGGATGTCGATC
rJMFF031L19- CCTGTCAACCCCATGTGGTAACGCAATTCATCTTCAGAAGCAGCATATGGGATGTCGATC
rJMFF015I18- CCTGTCAACCCCATGTGGTAACGCAATTCATCTTCAGAAGCAGCATATGGGATGTCGATC
rJMSF051D17- CCTGTCAACCCCATGTGGTAACGCAATTCATCTTCAGAAGCAGCATATGGGATGTCGATC
JMFN003N22+ AGCAGCATATGGGATGTCGATC
JMFN016J20+ CCCCATGTGGTAACGCAATTCATCTTCAGAAGCAGCATATGGGATGTCGATC
JMSF051D17+ CCTGTCAACCCCATGTGGTAACGCAATTCATCTTCAGAAGCAGCATATGGGATGTCGATC
____________________________________________________________
consensus CCTGTCAACCCCATGTGGTAACGCAATTCATCTTCAGAAGCAGCATATGGGATGTCGATC
. : . : . : . : . : . :
rJMFF019O03- TTATTGCCCAAAATCAGAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATCC
rJMFF031L19- TTATTGCCCAAAATCAGAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATCC
rJMFF015I18- TTATTGCCCAAAATCANAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATCC
rJMSF051D17- TTATTGCCCAAAATCAGAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATCC
JMFN003N22+ TTATTGCCCAAAATCAGAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATCC
JMFN016J20+ TTATTGCCCAAAATCAGAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATAT
JMSF051D17+ TTATTGCCCAAAATCAGAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATCC
JMFF031L19+ GGGACTCATCAGAGAGGAGAGCATCC
JMFF019O03+ GCCCAAAATCAGAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATCC
____________________________________________________________
consensus TTATTGCCCAAAATCAGAAAAGGTACATTGGCCAGGGACTCATCAGAGAGGAGAGCATCC
. : . : . : . : . : . :
rJMFF019O03- AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
rJMFF031L19- AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
rJMFF015I18- AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
rJMSF051D17- AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
JMFN003N22+ AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
JMFN016J20+ AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
JMSF051D17+ AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
JMFF031L19+ AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
JMFF019O03+ AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
____________________________________________________________
consensus AACTCTTTCTTCGATTCTGCAAATCTTTCTTTATCATAGGCATCCACCAAATAAACAACC
. : . : . : . : . : . :
rJMFF019O03- GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
rJMFF031L19- GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
rJMFF015I18- GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
rJMSF051D17- GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
JMFN003N22+ GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
JMFN016J20+ GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
JMSF051D17+ GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
JMFF031L19+ GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
JMFF019O03+ GCATCCCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
____________________________________________________________
consensus GCAT-CCACCTTAGCATAATAGTCTTTCCAAACACGGCGAGCGATCTGATGCCCTCCCAA
. : . : . : . : . : . :
rJMFF019O03- GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
rJMFF031L19- GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
rJMFF015I18- GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGNGT
rJMSF051D17- GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
JMFN003N22+ GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
JMFN016J20+ GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
JMSF051D17+ GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
JMFF031L19+ GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
JMFF019O03+ GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
____________________________________________________________
consensus GTCAAAAGCTTTGAACTTGATTTTGCCAATACTCAGCTCCTCTGATGTTGGGTATTGTGT
. : . : . : . : . : . :
rJMFF019O03- TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
rJMFF031L19- TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
rJMFF015I18- TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGT
rJMSF051D17- TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
JMFN003N22+ TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
JMFN016J20+ TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
JMSF051D17+ TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
JMFF031L19+ TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
JMFF019O03+ TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
____________________________________________________________
consensus TGGTTGATGTTGAACCAATCTCTCATCTTTCAACATATGGAGCAAGGTGGTTTTCCCGGC
. : . : . : . : . : . :
rJMFF019O03- ATTGTCGAGGCCCAAGAACAAGATCTTGGCCTCCTTCTGCCAGAGCCCAAGGGATGCAAG
rJMFF031L19- ATTGTCGAGG
rJMSF051D17- ATTGTCGAGGCCCAAGAACAAGATCTTGGCCTCCTTCTGCCAGAGCCCAAGGGATGCAAG
JMFN003N22+ ATTGTCGAGGCCCAAGAACAAGATCTTGGCCTCCTTCTGCCAGAGCCCAAGGGATGCAAG
JMFN016J20+ ATTGTCGAGGCCCAAGAACAAGATCTTGGCCTCCTTCTGCCAGAGCCCAAGGGATGCAAG
JMSF051D17+ ATTGTCGAGGCCCAAGAACAAGATCTTGGCCTCCTTCTGCCAGAGCCCAAGGGATGCAAG
JMFF031L19+ ATTGTCGAGGCCCAAGAACAAGATCTTGGCCTCCTTCTGCCAGAGCCCAAGGGATGCAAG
JMFF019O03+ ATTGTCGAGGCCCAAGAACAAGATCTTGGCCTCCTTCTGCCAGAGCCCAAGGGATGCAAG
____________________________________________________________
consensus ATTGTCGAGGCCCAAGAACAAGATCTTGGCCTCCTTCTGCCAGAGCCCAAGGGATGCAAG
. : . : . : . : . : . :
rJMFF019O03- AATTCCGTAGAACCAATCGACCAAGAACATCTTTCCTTACCTAAGCTACGATCCGATTGC
rJMSF051D17- AATTCCGTAGAACCAATCGACCAAGAACATCTTTCCTTACCTAAGCTACGATCCGATTGC
JMFN003N22+ AATTCCGTAGAACCAATCGACCAAGAACATCTTTCCTTACCTAAGCTACGATCCGATTGC
JMFN016J20+ AATTCCGTAGAACCAATCGACCAAGAACATCTTTCCTTACCTAAGCTACGATCCGATTGC
JMSF051D17+ AATTCCGTAGAACCAATCGACCAAGAACATCTTTCCTTACCTAAGCTACGATCCGATTGC
JMFF031L19+ AATTCCGTAGAACCAATCGACCAAGAACATCTTTCCTTACCTAAGCTACGATCCGATTGC
JMFF019O03+ AATTCCGTAGAACCAATCGACCAAGAACATCTTTCCTTACCTAAGCTACGATCCGATTGC
____________________________________________________________
consensus AATTCCGTAGAACCAATCGACCAAGAACATCTTTCCTTACCTAAGCTACGATCCGATTGC
. : . : . : . : . : . :
rJMFF019O03- GA
rJMSF051D17- GAACGAAGCTCCGATCCGAATAGCAGACCCA
JMFN003N22+ GAACGAAGCTCCGATCCGAATAGCAGACCCAAGGAATCAAGGAAGGAGGAGAAAGAAGCA
JMFN016J20+ GAACGAAGCTCCGATCCGAATAGCAGACCCAAGGAATCAAGGAAGGAGGAGAAAGAAGCA
JMSF051D17+ GAACGAAGCTCCGATCCGAATAGCAGACCCAAGGAATCAAGGAAGGAGGAGAAAGAAGCA
JMFF031L19+ GAACGAAGCTCCGATCCGAATAGCAGACCCAAGGAATCAAGGAAGGAGGAGAAAGAAGCA
JMFF019O03+ GAACGAAGCTCCGATCCGAATAGCAGACCCAAGGAATCAAGGAAGGAGGAGAAAGAAGCA
____________________________________________________________
consensus GAACGAAGCTCCGATCCGAATAGCAGACCCAAGGAATCAAGGAAGGAGGAGAAAGAAGCA
. : . : . : . : . : . :
JMFN003N22+ GAAGAATGAAAAAAAAGGAAAAAAAATCTACAAAGGCAGCGATTGGATCGATGCGTAGAT
JMFN016J20+ GAAGAATGAAAAAAAAGGAAAAAAAATCTACAAAGGCAGCGATTGGATCGATGCGTAGAT
JMSF051D17+ GAAGAATGAAAAAAAAGGAAAAAAAATCTACAAAGGCAGCGATTGGATCGATGCGTAGAT
JMFF031L19+ GAAGAATGAAAAAAAAGGAAAAAAAATCTACAAAGGCAGCGATTGGATCGATGCGTAGAT
JMFF019O03+ GAAGAATGAAAAAAAAGGAAAAAAAATCTACAAAGGCAGCGATTGGATCGATGCGTAGAT
____________________________________________________________
consensus GAAGAATGAAAAAAAAGGAAAAAAAATCTACAAAGGCAGCGATTGGATCGATGCGTAGAT
. : . : . : . : . : . :
JMFN003N22+ CGACCGATAAACGATCTACCAGCGCCGCATTCGGATTGTCTTTCGATTGATTCAA
JMFN016J20+ CGACCGATAAACGATCTACCAG
JMSF051D17+ CGACCGATAAACGATCTACCAGCGCCGCATTCGGATTGTCTTTCGATTGATTCAA
JMFF031L19+ CGACCGATAAACGATCTACCAGCGCCGCATTCGGATTGTCTTTCGATTGATTCAA
JMFF019O03+ CGACCGATAAACGATCTACCAGCGCCGCATTCGGATTGTCTTTCGATTGATTCAACGATC
____________________________________________________________
consensus CGACCGATAAACGATCTACCAGCGCCGCATTCGGATTGTCTTTCGATTGATTCAACGATC