clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF007D20 | Sequence | 410 | 002380 (5) | ref|XP_010086894.1| | 2e-25 | 40S ribosomal protein S30 [Morus notabilis] gb|EXB24685.1| 40S ribosomal protein | 370 | 002380 (5) | ref|XP_010086894.1| | 1e-25 | 40S ribosomal protein S30 [Morus notabilis] gb|EXB24685.1| 40S ribosomal protein |
JMFN033D07 | Sequence | 569 | 002380 (5) | ref|XP_010670553.1| | 2e-25 | PREDICTED: 40S ribosomal protein S30 [Beta vulgaris subsp. vulgaris] ref|XP_0106 | |||||
JMSF039F08 | Sequence | 485 | 002380 (5) | ref|XP_003608708.1| | 2e-25 | 40S ribosomal protein S30 [Medicago truncatula] ref|XP_003611308.1| 40S ribosoma | 436 | 002380 (5) | ref|XP_003608708.1| | 1e-25 | 40S ribosomal protein S30 [Medicago truncatula] ref|XP_003611308.1| 40S ribosoma |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig002380============================================ 592 310 ----------------------------------------------->JMSF039F08 <-----------------------------------------------rJMSF039F08 397 -------------------------------->JMFF007D20 <--------------------------------rJMFF007D20
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------------>JMFN033D07-