clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF018A13 | Sequence | 477 | 011978 (6) | ref|XP_004239154.2| | 5e-20 | PREDICTED: E3 ubiquitin-protein ligase TRAF7 [Solanum lycopersicum] | 780 | 011978 (6) | ref|XP_009599796.1| | 2e-133 | PREDICTED: E3 ubiquitin-protein ligase TRAF7 [Nicotiana tomentosiformis] |
JMSF018K24 | Sequence | 312 | 011978 (6) | 736 | 011978 (6) | ref|XP_009599796.1| | 2e-99 | PREDICTED: E3 ubiquitin-protein ligase TRAF7 [Nicotiana tomentosiformis] | |||
JMSF042G04 | Sequence | 682 | 011978 (6) | ref|XP_004239154.2| | 8e-56 | PREDICTED: E3 ubiquitin-protein ligase TRAF7 [Solanum lycopersicum] | 795 | 011978 (6) | ref|XP_009599796.1| | 9e-133 | PREDICTED: E3 ubiquitin-protein ligase TRAF7 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011978============================================1486 6 -------------------->JMSF018K24 <-------------------------------------------------rJMSF018K24 108 --------------------------------------------->JMSF042G04 <----------------------------------------------------rJMSF042G04 124 ------------------------------->JMSF018A13 <---------------------------------------------------rJMSF018A13
The following clones don't have the opposite end in this pair.