clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF015G03 | Sequence | 526 | 012860 (10) | ref|XP_009613230.1| | 107 | PREDICTED: uncharacterized protein LOC104106393 [Nicotiana tomentosiformis] | 693 | 012860 (10) | ref|XP_009613230.1| | 108 | PREDICTED: uncharacterized protein LOC104106393 [Nicotiana tomentosiformis] |
JMFN005P18 | Sequence | 576 | 012860 (10) | emb|CAN82364.1| | 4e-20 | hypothetical protein VITISV_027615 [Vitis vinifera] | |||||
JMFN015M19 | Sequence | 558 | 012860 (10) | emb|CAN82364.1| | 5e-20 | hypothetical protein VITISV_027615 [Vitis vinifera] | |||||
JMFN044H18 | Sequence | 616 | 012860 (10) | ref|XP_009613230.1| | 107 | PREDICTED: uncharacterized protein LOC104106393 [Nicotiana tomentosiformis] | |||||
JMSF002P23 | Sequence | 286 | 012860 (10) | ref|XP_009613230.1| | 82.4 | PREDICTED: uncharacterized protein LOC104106393 [Nicotiana tomentosiformis] | 656 | 012860 (10) | ref|XP_009613230.1| | 108 | PREDICTED: uncharacterized protein LOC104106393 [Nicotiana tomentosiformis] |
JMSF036N20 | Sequence | 588 | 012860 (10) | emb|CAN82364.1| | 5e-20 | hypothetical protein VITISV_027615 [Vitis vinifera] | 535 | 012860 (10) | emb|CAN82364.1| | 3e-20 | hypothetical protein VITISV_027615 [Vitis vinifera] |
JMSF037N20 | Sequence | 534 | 012860 (10) | emb|CAN82364.1| | 3e-20 | hypothetical protein VITISV_027615 [Vitis vinifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012860============================================ 693 1 --------------------------------------------------------------------------->JMFF015G03 <---------------------------------------------------------------------------------------------------rJMFF015G03 50 --------------------------------------->JMSF002P23 <--------------------------------------------------------------------------------------------rJMSF002P23 160 ----------------------------------------------------------------------------------->JMSF036N20 <----------------------------------------------------------------------------rJMSF036N20
The following clones don't have the opposite end in this pair.
---------------------------------------------------------------------------------->JMFN005P18- <----------------------------------------------------------------------------rJMSF037N20- ---------------------------------------------------------------------------------------->JMFN044H18- -------------------------------------------------------------------------------->JMFN015M19-