clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF020J20 | Sequence | 499 | 008515 (10) | ref|XP_010252234.1| | 3e-07 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | 694 | 008515 (10) | ref|XP_010252234.1| | 1e-06 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] |
JMFF026L10 | Sequence | 499 | 008515 (10) | ref|XP_010252234.1| | 2e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | 608 | 008515 (10) | ref|XP_010252235.1| | 3e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X2 [Nelumbo nucifera] |
JMFN004A12 | Sequence | 609 | 008515 (10) | ref|XP_010252234.1| | 3e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | |||||
JMFN019A13 | Sequence | 478 | 008515 (10) | ref|XP_010252235.1| | 4e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X2 [Nelumbo nucifera] | |||||
JMSF021K11 | Sequence | 628 | 008515 (10) | ref|XP_010252234.1| | 4e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | 587 | 008515 (10) | ref|XP_010252234.1| | 3e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] |
JMSF038E06 | Sequence | 672 | 008515 (10) | ref|XP_010252234.1| | 5e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] | 708 | 008515 (10) | ref|XP_010252234.1| | 6e-08 | PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig008515============================================ 730 3 ------------------------------------------------------------------->JMFF020J20 <----------------------------------------------------------------------------------------------rJMFF020J20 23 ------------------------------------------------------------------------------------------->JMSF038E06 <------------------------------------------------------------------------------------------------rJMSF038E06 122 ------------------------------------------------------------------->JMFF026L10 <----------------------------------------------------------------------------------rJMFF026L10 143 ------------------------------------------------------------------------------------->JMSF021K11 <--------------------------------------------------------------------------------rJMSF021K11
The following clones don't have the opposite end in this pair.
----------------------------------------------------------------->JMFN019A13- ----------------------------------------------------------------------------------->JMFN004A12-