Contig 008515:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF020J20Sequence499008515 (10)ref|XP_010252234.1|3e-07PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera]694008515 (10)ref|XP_010252234.1|1e-06PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera]
JMFF026L10Sequence499008515 (10)ref|XP_010252234.1|2e-08PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera]608008515 (10)ref|XP_010252235.1|3e-08PREDICTED: uncharacterized protein LOC104593877 isoform X2 [Nelumbo nucifera]
JMFN004A12Sequence609008515 (10)ref|XP_010252234.1|3e-08PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera]
JMFN019A13Sequence478008515 (10)ref|XP_010252235.1|4e-08PREDICTED: uncharacterized protein LOC104593877 isoform X2 [Nelumbo nucifera]
JMSF021K11Sequence628008515 (10)ref|XP_010252234.1|4e-08PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera]587008515 (10)ref|XP_010252234.1|3e-08PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera]
JMSF038E06Sequence672008515 (10)ref|XP_010252234.1|5e-08PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera]708008515 (10)ref|XP_010252234.1|6e-08PREDICTED: uncharacterized protein LOC104593877 isoform X1 [Nelumbo nucifera]

Alignment

This contig is upended


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rJMFF020J20-                                                            AACTTTTTTT
                      ____________________________________________________________
consensus                                                               AACTTTTTTT
 
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rJMFF020J20-          AGAAGCTAACAGCAGAAACGGGAAACAGATACAAAATGACGTCGTTTTGGGTCAGGACGC
rJMSF038E06-                     GCAGAAACGGGAAACAGATACAAAATGACGTCGTTTTGGGTCAGGACGC
JMSF038E06+                                                          TGGGTCAGGACGC
                      ____________________________________________________________
consensus             AGAAGCTAACAGCAGAAACGGGAAACAGATACAAAATGACGTCGTTTTGGGTCAGGACGC
 
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rJMFF020J20-          ACAATGCATTGTCTCTGGTGCACGATATAATACACACAAATAAACTAGCATATATGACAT
JMFN004A12+                                                AAATAAACTAGCATATATGACAT
rJMSF038E06-          ACAATGCATTGTCTCTGGTGCACGATATAATACACACAAATAAACTAGCATATATGACAT
JMSF038E06+           ACAATGCATTGTCTCTGGTGCACGATATAATACACACAAATAAACTAGCATATATGACAT
rJMFF026L10-                                                             ATATGACAT
JMSF021K11+                                          ACACACAAATAAACTAGCATATATGACAT
                      ____________________________________________________________
consensus             ACAATGCATTGTCTCTGGTGCACGATATAATACACACAAATAAACTAGCATATATGACAT
 
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rJMFF020J20-          AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
JMFN004A12+           AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
rJMSF038E06-          AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
JMSF038E06+           AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
rJMFF026L10-          AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
JMSF021K11+           AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
rJMSF021K11-                      ATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
                      ____________________________________________________________
consensus             AATACATAGATAATAGAGCAATCTCAATTAAGTTAGTTGGATAGTTGTCTCCGAGCAATA
 
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rJMFF020J20-          TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
JMFN019A13+                                           ACAACTAGGCTGAGAGCTCATCTTATTA
JMFN004A12+           TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
rJMSF038E06-          TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
JMFF020J20+                                                 AGGCTGAGAGCTCATCTTATTA
JMSF038E06+           TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
rJMFF026L10-          TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
JMSF021K11+           TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
JMFF026L10+                                                     TGAGAGCTCATCTTATTA
rJMSF021K11-          TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
                      ____________________________________________________________
consensus             TAATTGTCTTAGTTTGAGACAACTATGAACTAACAACTAGGCTGAGAGCTCATCTTATTA
 
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rJMFF020J20-          TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMFN019A13+           TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMFN004A12+           TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
rJMSF038E06-          TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMFF020J20+           TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMSF038E06+           TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
rJMFF026L10-          TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMSF021K11+           TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
JMFF026L10+           TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
rJMSF021K11-          TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
                      ____________________________________________________________
consensus             TTCGTAGGTACATAATAATGGCAGGAAAGAGATACTAACCCACCGGAAAAAGCAAACACA
 
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rJMFF020J20-          CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMFN019A13+           CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMFN004A12+           CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
rJMSF038E06-          CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMFF020J20+           CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMSF038E06+           CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
rJMFF026L10-          CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMSF021K11+           CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
JMFF026L10+           CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
rJMSF021K11-          CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
                      ____________________________________________________________
consensus             CCTTAAAGATTGCTAAGCCCGCAATAATATATATAATATTATATTAGACAGAAGCAATTT
 
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rJMFF020J20-          TGACAGCGTCGTTTTCTCCGACGACACGGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMFN019A13+           TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMFN004A12+           TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
rJMSF038E06-          TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMFF020J20+           TGACAGCGTCGTTTTCTCCGACGACACGGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMSF038E06+           TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
rJMFF026L10-          TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMSF021K11+           TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
JMFF026L10+           TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
rJMSF021K11-          TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
                      ____________________________________________________________
consensus             TGACAGCGTCGTTTTCTCCGACGACACAGGCACAACCTTCGCCGCACTCGAACTGAATCC
 
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rJMFF020J20-          TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMFN019A13+           TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMFN004A12+           TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
rJMSF038E06-          TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMFF020J20+           TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMSF038E06+           TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
rJMFF026L10-          TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMSF021K11+           TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
JMFF026L10+           TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
rJMSF021K11-          TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
                      ____________________________________________________________
consensus             TGCCGGCGTCGGGGCCGGCAGTCTTTGGAACCACGCACGACCACCCTTCCGGGCACACGC
 
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rJMFF020J20-          AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMFN019A13+           AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMFN004A12+           AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
rJMSF038E06-          AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMFF020J20+           AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMSF038E06+           AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
rJMFF026L10-          AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMSF021K11+           AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
JMFF026L10+           AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
rJMSF021K11-          AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
                      ____________________________________________________________
consensus             AGAAGACCTTGGAGTTCGCCGGCGGCGACCCCTCCCGCGCCTGCTTTAACTCTTCCTCGC
 
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rJMFF020J20-          TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMFN019A13+           TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMFN004A12+           TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
rJMSF038E06-          TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMFF020J20+           TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMSF038E06+           TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
rJMFF026L10-          TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMSF021K11+           TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
JMFF026L10+           TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
rJMSF021K11-          TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
                      ____________________________________________________________
consensus             TCAGCGGCTCAGTCGCCTTGATGGAGCAGGAGCAAGGGCCGGAGCAGCTGGAGAAAGGCT
 
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rJMFF020J20-          TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMFN019A13+           TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMFN004A12+           TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
rJMSF038E06-          TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMFF020J20+           TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMSF038E06+           TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
rJMFF026L10-          TGCCGGACTTGGATGGGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMSF021K11+           TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
JMFF026L10+           TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
rJMSF021K11-          TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
                      ____________________________________________________________
consensus             TGCCGGACTTGGAT-GGATCGGTGGTCTTAGTTATGGTGCAAGTCCAGCCATCGTCGCAC
 
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rJMFF020J20-          TTGCAAAACGCCGCCTTGTCACCGC                                   
JMFN019A13+           TTGCAAAACGCCGCCTTGTCACCGCCGTCCA                             
JMFN004A12+           TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTA             
rJMSF038E06-          TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGAT  
JMFF020J20+           TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGAT  
JMSF038E06+           TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGAT  
rJMFF026L10-          TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATC 
JMSF021K11+           TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATC 
JMFF026L10+           TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATC 
rJMSF021K11-          TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATCC
                      ____________________________________________________________
consensus             TTGCAAAACGCCGCCTTGTCACCGCCGTCCATGGTGTCACTGCCTTACCGTATCGGATCC