clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFN016B21 | Sequence | 583 | 011402 (9) | emb|CDO99520.1| | 1e-37 | unnamed protein product [Coffea canephora] | |||||
JMSF007N19 | Sequence | 302 | 011402 (9) | emb|CDO99520.1| | 8e-12 | unnamed protein product [Coffea canephora] | 734 | 011402 (9) | ref|XP_004134699.1| | 1e-95 | PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis sativus] ref|X |
JMSF022E11 | Sequence | 450 | 011402 (9) | gb|EYU43385.1| | 4e-65 | hypothetical protein MIMGU_mgv1a009433mg [Erythranthe guttata] | |||||
JMSF025D19 | Sequence | 219 | 011402 (9) | gb|KHN16259.1| | 3e-13 | 30S ribosomal protein S5, chloroplastic [Glycine soja] | 162 | 011402 (9) | gb|KHN16259.1| | 2e-13 | 30S ribosomal protein S5, chloroplastic [Glycine soja] |
JMSF031H06 | Sequence | 653 | 011402 (9) | emb|CDO99520.1| | 2e-40 | unnamed protein product [Coffea canephora] | 761 | 011402 (9) | ref|XP_004134699.1| | 6e-98 | PREDICTED: 30S ribosomal protein S5, chloroplastic-like [Cucumis sativus] ref|X |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig011402============================================1087 81 ----------------------------------------------------------->JMSF031H06 <---------------------------------------------------------------------rJMSF031H06 105 --------------------------->JMSF007N19 <------------------------------------------------------------------rJMSF007N19 925 ------------------->JMSF025D19 <--------------rJMSF025D19
The following clones don't have the opposite end in this pair.
<------------------------------------------------------------------------rJMSF042L06* ---------------------------------------------------->JMFN016B21- <---------------------------------------rJMSF022E11-