clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF012N11 | Sequence | 589 | 009402 (9) | gb|AGZ15274.1| | 2e-15 | putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum] | 730 | 009402 (9) | ref|XP_009772065.1| | 2e-68 | PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris] |
JMFN034H19 | Sequence | 616 | 009402 (9) | ref|NP_001274281.1| | 6e-52 | aquaporin SIP1-2-like [Solanum lycopersicum] dbj|BAO18650.1| small basic intrins | |||||
JMFN044F05 | Sequence | 590 | 009402 (9) | gb|AGZ15274.1| | 7e-42 | putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum] | |||||
JMFS169F12 | Sequence | 645 | 009402 (9) | ref|NP_001274281.1| | 3e-84 | aquaporin SIP1-2-like [Solanum lycopersicum] dbj|BAO18650.1| small basic intrins | |||||
JMSF027D03 | Sequence | 655 | 009402 (9) | gb|AGZ15274.1| | 5e-25 | putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum] | 721 | 009402 (9) | ref|XP_009772065.1| | 7e-80 | PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris] |
JMSF030C01 | Sequence | 663 | 009402 (9) | gb|AGZ15274.1| | 5e-25 | putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum] | 703 | 009402 (9) | ref|XP_009772065.1| | 8e-80 | PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009402============================================1174 2 ------------------------------------------------->JMFF012N11 <---------------------------------------------------------------rJMFF012N11 30 -------------------------------------------------------->JMSF030C01 <------------------------------------------------------------rJMSF030C01 54 ------------------------------------------------------>JMSF027D03 <------------------------------------------------------------rJMSF027D03
The following clones don't have the opposite end in this pair.
------------------------------------------------->JMFN044F05- --------------------------------------------------->JMFN034H19- ------------------------------------------------------>JMFS169F12-