| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF012N11 | Sequence | 589 | 009402 (9) | gb|AGZ15274.1| | 2e-15 | putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum] | 730 | 009402 (9) | ref|XP_009772065.1| | 2e-68 | PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris] |
| JMFN034H19 | Sequence | 616 | 009402 (9) | ref|NP_001274281.1| | 6e-52 | aquaporin SIP1-2-like [Solanum lycopersicum] dbj|BAO18650.1| small basic intrins | |||||
| JMFN044F05 | Sequence | 590 | 009402 (9) | gb|AGZ15274.1| | 7e-42 | putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum] | |||||
| JMFS169F12 | Sequence | 645 | 009402 (9) | ref|NP_001274281.1| | 3e-84 | aquaporin SIP1-2-like [Solanum lycopersicum] dbj|BAO18650.1| small basic intrins | |||||
| JMSF027D03 | Sequence | 655 | 009402 (9) | gb|AGZ15274.1| | 5e-25 | putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum] | 721 | 009402 (9) | ref|XP_009772065.1| | 7e-80 | PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris] |
| JMSF030C01 | Sequence | 663 | 009402 (9) | gb|AGZ15274.1| | 5e-25 | putative small basic intrinsic protein, partial [Taraxacum brevicorniculatum] | 703 | 009402 (9) | ref|XP_009772065.1| | 8e-80 | PREDICTED: aquaporin SIP1-1-like [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
rJMSF027D03- ACTT
rJMFF012N11- TTATTGGATATAAAAATTCCAGTTCAATCAACTT
rJMSF030C01- ACTT
____________________________________________________________
consensus TTATTGGATATAAAAATTCCAGTTCAATCAACTT
. : . : . : . : . : . :
rJMSF027D03- ATATGAATCAATCTAAAACACGGAGTCCATTTACTAGACGTCCCCACTTAGCTATCATAA
rJMFF012N11- ACATGAATCAATCTAAAACACGGAGTCCATTTACTAGACGT--CCACTTAGCTATCATAA
rJMSF030C01- ACATGAATCAATCTAAAACACGGAGTCCATTTACTAGACGT--CCACTTAGCTATCATAA
____________________________________________________________
consensus ACATGAATCAATCTAAAACACGGAGTCCATTTACTAGACGT--CCACTTAGCTATCATAA
. : . : . : . : . : . :
rJMSF027D03- CTATATAGCAACGATCTAAAACCAGGACAATCAATATATTGAACAGTCCTTTTAGTTCTT
rJMFF012N11- CTATATAGCAACGATCTAAAACCAGGACAATCAATCTATTGAACTGTCTTTTTAGTTCTT
rJMSF030C01- CTATATAGCAACGATCTAAAACCAGGACAATCAATCTATTGAACTGTCTTTTTAGTTCTT
____________________________________________________________
consensus CTATATAGCAACGATCTAAAACCAGGACAATCAATCTATTGAACTGTCTTTTTAGTTCTT
. : . : . : . : . : . :
rJMSF027D03- CTTCGCCTTTGGCTGCTTCTTTGGCTTCACCGGTGGTGGAAATATAGCTCGGAACATCCA
rJMFF012N11- CTTCGCCTTTG------------GCTTCACTGGCGGTGGAAATATAGCTCGGAACATCCA
rJMSF030C01- CTTCGCCTTTG------------GCTTCACTGGCGGTGGAAATATAGCTCGGAACATCCA
____________________________________________________________
consensus CTTCGCCTTTG------------GCTTCACTGGCGGTGGAAATATAGCTCGGAACATCCA
. : . : . : . : . : . :
rJMSF027D03- CGCCGCCAATATTGCCCCGATGAAGGGGCAAATCCAGTAAACATAAAACTGCTCCCATGT
rJMFF012N11- CGCCGCCAATATTGCTCCGATGAAGGGGCAAATCCAGTAAACATAAAACTGCTCCCGCGT
rJMSF030C01- CGCCGCCAATATTGCTCCGATGAAGGGGCAAATCCAGTAAACATAAAACTGCTCCCGCGT
JMFS169F12+ AGGGGCAAATCCAGTAAACATAAAACTGCTCCCGCGT
____________________________________________________________
consensus CGCCGCCAATATTGCTCCGATGAAGGGGCAAATCCAGTAAACATAAAACTGCTCCCGCGT
. : . : . : . : . : . :
rJMSF027D03- ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
rJMFF012N11- ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
rJMSF030C01- ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
JMFS169F12+ ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
____________________________________________________________
consensus ATTGTGCCAGTTATTTATGTAAGCCCAGCCGAATGCATTAGCAGGATTCATGGAAGGTCC
. : . : . : . : . : . :
rJMSF027D03- TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
rJMFF012N11- TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
rJMSF030C01- TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
JMFS169F12+ TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
JMFN034H19+ ACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
____________________________________________________________
consensus TGTATAGCTAGAACCAGCAACTACTAGGACAACTGTTGGTATGGTAAGCAACCAATTCTT
. : . : . : . : . : . :
rJMSF027D03- GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
rJMFF012N11- GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
rJMSF030C01- GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
JMFS169F12+ GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
JMFN034H19+ GACAAATGAATTTNTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
JMFN044F05+ ATGAA
____________________________________________________________
consensus GACAAATGAATTTTTAGGACCCTTCAGGATGACAAGAAAAACAATAAAGGAACTTATGAA
. : . : . : . : . : . :
rJMSF027D03- AGTCAAGACTCCCTCAGCAATGGCTCCGATGTGAATGTCAACCTTCAAAGAAGGTCCAAT
rJMFF012N11- AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
rJMSF030C01- AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
JMFS169F12+ AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
JMFN034H19+ AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
JMFN044F05+ AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
JMSF027D03+ CAAAGAAGGTCCAAT
JMSF030C01+ TCCAAT
____________________________________________________________
consensus AGTCAAGACTCCCTCAGCAATGGCTCCGGTGTGAAGGTCAACCTTCAAAGAAGGTCCAAT
. : . : . : . : . : . :
rJMSF027D03- AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
rJMFF012N11- AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
rJMSF030C01- AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMFS169F12+ AATCATGTGTTTGAGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMFN034H19+ AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMFN044F05+ AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMSF027D03+ AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
JMSF030C01+ AATCANGTGTTTGTGATGNGGAGGGATAANTTCCAGAATNGCCA-TGCACCACCAACAGC
____________________________________________________________
consensus AATCATGTGTTTGTGATGTGGAGGGATAACTTCCAGAATCGCCATTGCACCACCAACAGC
. : . : . : . : . : . :
rJMSF027D03- ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCGGAGATGAGAGAGTCATCACCGAGGCC
rJMFF012N11- ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
rJMSF030C01- ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMFS169F12+ ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMFN034H19+ ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMFN044F05+ ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMSF027D03+ ACCAGCAGCNTGAGCTGGAAAACGGACGGCGGCGGAGATGAGAGAGTCATCACCGAGGCC
JMFF012N11+ TGAGNTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
JMSF030C01+ ACCAGCAGCNTGAGNTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
____________________________________________________________
consensus ACCAGCAGCCTGAGCTGGAAAACGGACGGCGGCCGAGATGAGAGAGTCATCACCGAGGCC
. : . : . : . : . : . :
rJMSF027D03- AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGGACATCACT
rJMFF012N11- AGC--CATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
rJMSF030C01- AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMFS169F12+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMFN034H19+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMFN044F05+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMSF027D03+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGGACATCACT
JMFF012N11+ AGC--CATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
JMSF030C01+ AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCNGGCGCCGCCGAGAGCATCANT
____________________________________________________________
consensus AGCCGCATAAAAGGCAGCAATACCGGTAGGGTTAAAGCTGGCGCCGCCGAGAGCATCACT
. : . : . : . : . : . :
rJMSF027D03- GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGG
rJMFF012N11- GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAG
rJMSF030C01- GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGA
JMFS169F12+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMFN034H19+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMFN044F05+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMSF027D03+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMFF012N11+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
JMSF030C01+ GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
____________________________________________________________
consensus GATGATACCAAAAACGAACAGGAGTATGAAAAAAAGGACGGTGGTGACGGAGAGAACGGC
. : . : . : . : . : . :
JMFS169F12+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMFN034H19+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMFN044F05+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMSF027D03+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMFF012N11+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
JMSF030C01+ CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
____________________________________________________________
consensus CATTGGATGGGCAATTCCAAGCAGCTTGGCGAGAACGGAAGTGCTGACGCCGAGCGTGGA
. : . : . : . : . : . :
JMFS169F12+ GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMFN034H19+ GGCGGAGAACACCCACAAGAAGGCCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMFN044F05+ GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMSF027D03+ GGCGGAGAACACCCACATGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMFF012N11+ GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
JMSF030C01+ GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
____________________________________________________________
consensus GGCGGAGAACACCCACAAGAAGGTCAACACCGCATCGCCGATCGCTGCCTTAATCACACC
. : . : . : . : . : . :
JMFS169F12+ CATATTCA
JMFN034H19+ CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
JMFN044F05+ CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
JMSF027D03+ CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
JMFF012N11+ CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
JMSF030C01+ CA--TTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
____________________________________________________________
consensus CATATTCACTCCAATCTGTTCCTAATCTCCGATCTGAATCAATAATTTAGCTTCGAATTG
. : . : . : . : . : . :
JMFN034H19+ TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTG
JMFN044F05+ TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
JMSF027D03+ TAGGCACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
JMFF012N11+ TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
JMSF030C01+ TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
____________________________________________________________
consensus TTGGAACAGCTCTCTCTCTACCCACGCTTGTATTGGGCAGAGGCGCTGAATGAATATGAA
. : . : . : . : . : . :
JMFN044F05+ TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCC
JMSF027D03+ TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCCCTACCAAGACACCCA
JMFF012N11+ TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCCCTACCAAGACACCCA
JMSF030C01+ TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCCCTACCAAGACACCCA
____________________________________________________________
consensus TTACCTACTTCTCCCCCAAACCCTAAACAATCACTCTCCTTCTCCCTACCAAGACACCCA
. : . : . : . : . : . :
JMSF027D03+ GTCAGCGAGCAGTAGGAAACTGGTTAAATTTTTATGAATAATTCGGAATTTCGTGTAGAT
JMFF012N11+ GTCAGCGAGCAGTAGGAAACTGGTTAAATTTTTATGAATAATTCGGAATTTCGTGTAGAT
JMSF030C01+ GTCAGCGAGCAGTAGGAAACTGGTTAAATTTTTATGAATAATTCGGAATTTCGTGTAGAT
____________________________________________________________
consensus GTCAGCGAGCAGTAGGAAACTGGTTAAATTTTTATGAATAATTCGGAATTTCGTGTAGAT
. : . : . : . : . : . :
JMSF027D03+ GGAAAACACGTGATTGGTAGGTCGAACGTAAGATCC
JMFF012N11+ GGAAAACACGTAATTAGTAGGTCGAACGTAAGATCCATGTTCATCTGAAATTGGAAATT
JMSF030C01+ GGAAAACACGTAATTAGTAGGTCGAACGTAAGATCCATGTTCATCTGAAATTGGAAATTC
____________________________________________________________
consensus GGAAAACACGTAATTAGTAGGTCGAACGTAAGATCCATGTTCATCTGAAATTGGAAATTC