clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMCP002D07 | Sequence | 566 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
JMCP003B08 | Sequence | 517 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
JMCP012D04 | Sequence | 246 | 001513 (10) | ||||||||
JMCP018D09 | Sequence | 587 | 001513 (10) | ref|XP_009763164.1| | 99.8 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
JMFF045L03 | Sequence | 507 | 001513 (10) | ref|XP_008345060.1| | 101 | PREDICTED: uncharacterized protein LOC103407964 [Malus domestica] ref|XP_0093452 | 486 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] |
JMSF019C12 | Sequence | 514 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
JMSF020C12 | Sequence | 513 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
JMSF048L13 | Sequence | 558 | 001513 (10) | ref|XP_008345060.1| | 100 | PREDICTED: uncharacterized protein LOC103407964 [Malus domestica] ref|XP_0093452 | 507 | 001513 (10) | ref|XP_008345060.1| | 100 | PREDICTED: uncharacterized protein LOC103407964 [Malus domestica] ref|XP_0093452 |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001513============================================ 587 80 ------------------------------------------------------------------------------------->JMFF045L03 <----------------------------------------------------------------------------------rJMFF045L03 83 --------------------------------------------------------------------------------------------->JMSF048L13 <-------------------------------------------------------------------------------------rJMSF048L13
The following clones don't have the opposite end in this pair.
<------------------------------------------------------------------------------------rJMSF020C12- ----------------------------------------------------------------------------------------------->JMCP002D07- -------------------------------------------------------------------------------------------------->JMCP018D09- -------------------------------------------------------------------------------------->rJMCP003B08- <------------------------------------------------------------------------------------rJMSF019C12- ----------------------------------------->JMCP012D04-