| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMCP002D07 | Sequence | 566 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
| JMCP003B08 | Sequence | 517 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
| JMCP012D04 | Sequence | 246 | 001513 (10) | ||||||||
| JMCP018D09 | Sequence | 587 | 001513 (10) | ref|XP_009763164.1| | 99.8 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
| JMFF045L03 | Sequence | 507 | 001513 (10) | ref|XP_008345060.1| | 101 | PREDICTED: uncharacterized protein LOC103407964 [Malus domestica] ref|XP_0093452 | 486 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] |
| JMSF019C12 | Sequence | 514 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
| JMSF020C12 | Sequence | 513 | 001513 (10) | ref|XP_009763164.1| | 101 | PREDICTED: uncharacterized protein LOC104215116 [Nicotiana sylvestris] | |||||
| JMSF048L13 | Sequence | 558 | 001513 (10) | ref|XP_008345060.1| | 100 | PREDICTED: uncharacterized protein LOC103407964 [Malus domestica] ref|XP_0093452 | 507 | 001513 (10) | ref|XP_008345060.1| | 100 | PREDICTED: uncharacterized protein LOC103407964 [Malus domestica] ref|XP_0093452 |
This contig is upended
. : . : . : . : . : . :
JMSF048L13+ TTTTACTAGAACTCTGAACTCTTATTTCA
JMCP018D09+ GTAAAACAAATGACAACATTTTACTAGAACTCTGAACTCTTATTTCA
JMFF045L03+ ACTAGAACTCTGAACTCTTATTTCA
JMCP012D04+ GAACTCTTATTTCA
rJMFF045L03- ACTAGAACTCTGAACTCTTATTTCA
JMCP002D07+ ACTAGAACTCTGAACTCTTATTTCA
____________________________________________________________
consensus GTAAAACAAATGACAACATTTTACTAGAACTCTGAACTCTTATTTCA
. : . : . : . : . : . :
JMSF048L13+ GAATCATATTCTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
rJMSF048L13- AACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
JMCP018D09+ GAATCATATTCTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
rJMCP003B08+ AAGGAAATGCAGAATCTTGATTTATTTACAACAAA
JMFF045L03+ GAATCATATTCTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
rJMSF020C12- TATTCTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
rJMSF019C12- TATTCTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
JMCP012D04+ GAATCATATTgTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
rJMFF045L03- GAATCATATTCTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
JMCP002D07+ GAATCATATTCTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
____________________________________________________________
consensus GAATCATATTCTCAGGTAAACATGGAAGGAAATGCAGAATCTTGATTTATTTACAACAAA
. : . : . : . : . : . :
JMSF048L13+ ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
rJMSF048L13- ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
JMCP018D09+ ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
rJMCP003B08+ ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACCAGAATCTGATGACATT
JMFF045L03+ ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
rJMSF020C12- ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
rJMSF019C12- ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
JMCP012D04+ ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
rJMFF045L03- ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
JMCP002D07+ ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
____________________________________________________________
consensus ACATTAAACTTGAGTCTAAAAGCAAAAACATTATTTTAACAACTAGAATCTGATGACATT
. : . : . : . : . : . :
JMSF048L13+ TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
rJMSF048L13- TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
JMCP018D09+ TCAGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
rJMCP003B08+ TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
JMFF045L03+ TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
rJMSF020C12- TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
rJMSF019C12- TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
JMCP012D04+ TCTGTTCCTCCTGCCAAGACCACAGTTTgaatTTCCTAtgaATGACAGTGATATTATGTA
rJMFF045L03- TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
JMCP002D07+ TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
____________________________________________________________
consensus TCTGTTCCTCCTGCCAAGACCACAGTTTCTTATTCCTAACTATGACAGTGATATTATGTA
. : . : . : . : . : . :
JMSF048L13+ TTTGATGCCAAACTTGCTTTAGTGTCTTTGCTCTGTTTCTCCTGTTCAAACTTATCAATG
rJMSF048L13- TTTGATGCCAAACTTGCTTTAGTGTCTTTGCTCTGTTTCTCCTGTTCAAACTTATCAATG
JMCP018D09+ TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTTAAACTTATCAATG
rJMCP003B08+ TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTCAAACTTATCAATG
JMFF045L03+ TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTCAAACTTATCAATG
rJMSF020C12- TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTCAAACTTATCAATG
rJMSF019C12- TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTCAAACTTATCAATG
JMCP012D04+ TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTCAAACT
rJMFF045L03- TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTCAAACTTATCAATG
JMCP002D07+ TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTCAAACTTATCAATG
____________________________________________________________
consensus TTTGATGCCAAACTTGCTTTAGTGTCTTTGTTCTGTTTCTCCTGTTCAAACTTATCAATG
. : . : . : . : . : . :
JMSF048L13+ GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
rJMSF048L13- GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
JMCP018D09+ GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
rJMCP003B08+ GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
JMFF045L03+ GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
rJMSF020C12- GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
rJMSF019C12- GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
rJMFF045L03- GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
JMCP002D07+ GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
____________________________________________________________
consensus GCAATCTGAAGTTCATCTGTGCCTCCGACAGCTCTCATGGTGTAGAAATACACCCCAAAG
. : . : . : . : . : . :
JMSF048L13+ ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
rJMSF048L13- ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
JMCP018D09+ ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
rJMCP003B08+ ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
JMFF045L03+ ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
rJMSF020C12- ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
rJMSF019C12- ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
rJMFF045L03- ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
JMCP002D07+ ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
____________________________________________________________
consensus ACAAATCCTGACAAGCCTCCAGCAACTACAAGATTCTTGGTTTTGGGTGCAAGGCGATTG
. : . : . : . : . : . :
JMSF048L13+ AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
rJMSF048L13- AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
JMCP018D09+ AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
rJMCP003B08+ AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
JMFF045L03+ AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
rJMSF020C12- AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
rJMSF019C12- AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
rJMFF045L03- AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
JMCP002D07+ AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
____________________________________________________________
consensus AATGCTGTAAAAACAACCATCTTACAAGAATCACTATTGTGCTTCTGACCAGTTTCCGGC
. : . : . : . : . : . :
JMSF048L13+ GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
rJMSF048L13- GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
JMCP018D09+ GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
rJMCP003B08+ GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
JMFF045L03+ GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
rJMSF020C12- GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
rJMSF019C12- GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
rJMFF045L03- GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAA
JMCP002D07+ GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
____________________________________________________________
consensus GTCCAACCTCGCGGCGTCGGCGGGTCGCTGCGATTTGCGAAGAGTTGAAGAATGAGATGC
. : . : . : . : . : . :
JMSF048L13+ GTAGGAACAATAGGGTACTAGGGTTTACCCGTTTAGTCTAGC
rJMSF048L13- GTAGGAACAATAGGGTACTAGGGTTTACCCGTTTAGTCTAGC
JMCP018D09+ GTAGGAACAATAGGGTACTAGGGTTTACCCGTTTAGTCTAGCAATTACTCCGTATAA
rJMCP003B08+ GTAGGAACAATAGGGTACTAGGGTTTACCCGTTTAGTCTAGCAATTACTCCGTATAA
JMFF045L03+ GT
rJMSF020C12- GTAGGAACAATAGGGTACTAGGGTTT
rJMSF019C12- GTAGGAACAATAGGGTACTAGGGTTT
JMCP002D07+ GTAGGAACAATAGGGTACTAGGGTTTACCCGTTTAGTCTAGCAATTACTCCGTATAAGAT
____________________________________________________________
consensus GTAGGAACAATAGGGTACTAGGGTTTACCCGTTTAGTCTAGCAATTACTCCGTATAAGAT