clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMSF012A22 | Sequence | 440 | 009999 (8) | ref|XP_011086546.1| | 2e-28 | PREDICTED: superoxide dismutase [Fe] 3, chloroplastic [Sesamum indicum] | 776 | 009999 (8) | ref|XP_009786440.1| | 3e-114 | PREDICTED: superoxide dismutase [Fe] 3, chloroplastic isoform X2 [Nicotiana syl |
JMSF029G15 | Sequence | 508 | 009999 (8) | ref|XP_011086546.1| | 9e-64 | PREDICTED: superoxide dismutase [Fe] 3, chloroplastic [Sesamum indicum] | 808 | 009999 (8) | ref|XP_009624955.1| | 8e-102 | PREDICTED: superoxide dismutase [Fe] 3, chloroplastic isoform X2 [Nicotiana tom |
JMSF038J04 | Sequence | 666 | 009999 (8) | ref|XP_009786440.1| | 4e-88 | PREDICTED: superoxide dismutase [Fe] 3, chloroplastic isoform X2 [Nicotiana syl | 849 | 009999 (8) | ref|XP_009786442.1| | 4e-128 | PREDICTED: superoxide dismutase [Fe] 3, chloroplastic isoform X3 [Nicotiana syl |
JMSF049A14 | Sequence | 678 | 009999 (8) | ref|XP_011086546.1| | 3e-84 | PREDICTED: superoxide dismutase [Fe] 3, chloroplastic [Sesamum indicum] | 758 | 009999 (8) | ref|XP_009624954.1| | 2e-77 | PREDICTED: superoxide dismutase [Fe] 3, chloroplastic isoform X1 [Nicotiana tom |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009999============================================1164 14 ------------------------------------->JMSF012A22 <-------------------------------------------------------------------rJMSF012A22 17 --------------------------------------------------------->JMSF049A14 <----------------------------------------------------------------rJMSF049A14 46 -------------------------------------------------------->JMSF038J04 <------------------------------------------------------------------------rJMSF038J04 71 ------------------------------------------->JMSF029G15 <---------------------------------------------------------------------rJMSF029G15
The following clones don't have the opposite end in this pair.