clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF037L06 | Sequence | 584 | 009827 (9) | ref|XP_006438167.1| | 6e-71 | hypothetical protein CICLE_v10033974mg [Citrus clementina] gb|ESR51407.1| hypoth | 721 | 009827 (9) | ref|XP_009592206.1| | 322 | PREDICTED: uncharacterized protein LOC104089094 [Nicotiana tomentosiformis] |
JMFF039K20 | Sequence | 678 | 009827 (9) | ref|XP_009592206.1| | 294 | PREDICTED: uncharacterized protein LOC104089094 [Nicotiana tomentosiformis] | |||||
JMFF047J24 | Sequence | 586 | 009827 (9) | emb|CAO99129.1| | 3e-70 | hypothetical protein [Nicotiana tabacum] | 481 | 009827 (9) | ref|XP_009592206.1| | 172 | PREDICTED: uncharacterized protein LOC104089094 [Nicotiana tomentosiformis] |
JMSF005L04 | Sequence | 344 | 009827 (9) | ref|XP_010556193.1| | 99.8 | PREDICTED: uncharacterized protein LOC104825540 [Tarenaya hassleriana] | |||||
JMSF024L02 | Sequence | 677 | 009827 (9) | emb|CDP13273.1| | 3e-95 | unnamed protein product [Coffea canephora] | 707 | 009827 (9) | ref|XP_009592206.1| | 316 | PREDICTED: uncharacterized protein LOC104089094 [Nicotiana tomentosiformis] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig009827============================================ 982 1 ---------------------------------------------------------->JMFF047J24 <------------------------------------------------rJMFF047J24 37 --------------------------------------------------------->JMFF037L06 <------------------------------------------------------------------------rJMFF037L06 56 -------------------------------------------------------------------->JMSF024L02 <----------------------------------------------------------------------rJMSF024L02
The following clones don't have the opposite end in this pair.
---------------------------------->JMSF005L04- <------------------------------------rJMSF005J02* <--------------------------------------------------------------------rJMFF039K20-