clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF006E09 | Sequence | 462 | 012304 (13) | emb|CDO97048.1| | 1e-45 | unnamed protein product [Coffea canephora] | 778 | 012304 (13) | emb|CDO97048.1| | 3e-43 | unnamed protein product [Coffea canephora] |
JMFF009D10 | Sequence | 521 | 012304 (13) | emb|CDO97048.1| | 3e-45 | unnamed protein product [Coffea canephora] | 570 | 012304 (13) | gb|AAF31402.1| | 2e-16 | putative glycine-rich RNA binding protein 1 [Catharanthus roseus] |
JMFF023J09 | Sequence | 463 | 012304 (13) | emb|CDO97048.1| | 2e-45 | unnamed protein product [Coffea canephora] | 766 | 012304 (13) | emb|CDO97048.1| | 2e-43 | unnamed protein product [Coffea canephora] |
JMFN002G12 | Sequence | 488 | 012304 (13) | emb|CDO97048.1| | 2e-45 | unnamed protein product [Coffea canephora] | |||||
JMFN006N08 | Sequence | 604 | 012304 (13) | emb|CDO97048.1| | 3e-44 | unnamed protein product [Coffea canephora] | |||||
JMFN015M02 | Sequence | 627 | 012304 (13) | emb|CDO97048.1| | 5e-44 | unnamed protein product [Coffea canephora] | |||||
JMFN028O04 | Sequence | 445 | 012304 (13) | ||||||||
JMFN030B15 | Sequence | 296 | 012304 (13) | gb|EPS70351.1| | 3e-13 | hypothetical protein M569_04412, partial [Genlisea aurea] | |||||
JMSF040G20 | Sequence | 678 | 012304 (13) | emb|CDO97048.1| | 9e-44 | unnamed protein product [Coffea canephora] | 737 | 012304 (13) | emb|CDO97048.1| | 2e-43 | unnamed protein product [Coffea canephora] |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig012304============================================ 784 30 ---------------------------------------------------------->JMFF006E09 <----------------------------------------------------------------------------------------rJMFF006E09 30 ---------------------------------------------------------->JMFF023J09 <------------------------------------------------------------------------------------------------rJMFF023J09 47 ------------------------------------------------------------------------------------->JMSF040G20 <---------------------------------------------------------------------------------------------rJMSF040G20 64 ----------------------------------------------------------------->JMFF009D10 <---------------------------------------------------------------------rJMFF009D10
The following clones don't have the opposite end in this pair.
------------------------------------------------------------------------------->JMFN015M02- --------------------------------------------------------------------------->JMFN006N08- ------------------------------------------------------------->JMFN002G12- ------------------------------------->JMFN030B15- -------------------------------------------------------->JMFN028O04-