clone | seq. | 5'-sequence | 3'-sequence | ||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | ||
JMFF004P05 | Sequence | 163 | 001198 (12) | ref|XP_009617342.1| | 54.7 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| | 580 | 001198 (12) | ref|XP_009617342.1| | 87.8 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| |
JMFF012I09 | Sequence | 466 | 001198 (12) | ref|XP_009617342.1| | 87.8 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| | 580 | 001198 (12) | ref|XP_009617342.1| | 87.8 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| |
JMFF037M13 | Sequence | 580 | 001198 (12) | ref|XP_009617342.1| | 87.8 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| | |||||
JMFF040I08 | Sequence | 569 | 001198 (12) | ref|XP_009617342.1| | 87.8 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| | |||||
JMFF044H07 | Sequence | 647 | 001198 (12) | ref|XP_009617342.1| | 87.8 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| | 626 | 001198 (12) | ref|XP_009617342.1| | 87.8 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| |
JMFN006J10 | Sequence | 620 | 001198 (12) | ref|XP_009617342.1| | 88.2 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| | |||||
JMFN008P07 | Sequence | 584 | 001198 (12) | ref|XP_009617342.1| | 87.8 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| | |||||
JMSF005N11 | Sequence | 327 | 001198 (12) | ref|XP_009617342.1| | 75.9 | PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref| | 362 | 001198 (12) |
Explanatory notes:   "*" The opposite end is in another contig.  "**" The opposite end is in same contig.   "#" The opposite end is singlet.   "-" The opposite end has no seqence.
SCORE============================================Contig001198============================================ 711 1 ------------------------------------------------------------------------------------>JMFF044H07 <---------------------------------------------------------------------------------------rJMFF044H07 121 --------------------------------------------->JMSF005N11 <--------------------------------------------------rJMSF005N11 138 ---------------------->JMFF004P05 <-------------------------------------------------------------------------------rJMFF004P05 141 ---------------------------------------------------------------->JMFF012I09 <-------------------------------------------------------------------------------rJMFF012I09
The following clones don't have the opposite end in this pair.
<-------------------------------------------------------------------------------rJMFF040I08- -------------------------------------------------------------------------------------->JMFN006J10- --------------------------------------------------------------------------------->JMFN008P07- <---------------------------------------------------------------------------------rJMFF037M13-