Contig 001198:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004P05Sequence163001198 (12)ref|XP_009617342.1|54.7PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|580001198 (12)ref|XP_009617342.1|87.8PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|
JMFF012I09Sequence466001198 (12)ref|XP_009617342.1|87.8PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|580001198 (12)ref|XP_009617342.1|87.8PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|
JMFF037M13Sequence580001198 (12)ref|XP_009617342.1|87.8PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|
JMFF040I08Sequence569001198 (12)ref|XP_009617342.1|87.8PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|
JMFF044H07Sequence647001198 (12)ref|XP_009617342.1|87.8PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|626001198 (12)ref|XP_009617342.1|87.8PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|
JMFN006J10Sequence620001198 (12)ref|XP_009617342.1|88.2PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|
JMFN008P07Sequence584001198 (12)ref|XP_009617342.1|87.8PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|
JMSF005N11Sequence327001198 (12)ref|XP_009617342.1|75.9PREDICTED: uncharacterized protein LOC104109700 [Nicotiana tomentosiformis] ref|362001198 (12)

Alignment

This contig is upended


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JMSF005N11-                        AGGGAGAACGAACGGAAAAGTAAAAGATCAAATCGAAGAAAGAGAAA
JMFF044H07-                    GCCTAGGGAGAACGAACGGAAAAGTAAAAGATCAAATCGAAGAAAGAGAAA
rJMFF037M13+                                                                   AAA
JMFN006J10-                                        AAAGTAAAAGATCAAATCGAAGAAAGAGAAA
                      ____________________________________________________________
consensus                      GCCTAGGGAGAACGAACGGAAAAGTAAAAGATCAAATCGAAGAAAGAGAAA
 
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JMSF005N11-           ACTAGAATCGGAGAGACAAATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
JMFF004P05-                          ACAAATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
JMFF044H07-           ACTAGAATCGGAGAGACAAATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
rJMFF037M13+          ACTAGAATCGGAGAGACAAATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
JMFF012I09-                             AATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
JMFN006J10-           ACTAGAATCGGAGAGACAAATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
rJMFF004P05+                               CCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
rJMFF040I08+                            AATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
rJMFF012I09+                            AATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
JMFN008P07-                               TCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
rJMFF044H07+                                            AGAGGCAGAGAGCTTCGAATTGCAGC
                      ____________________________________________________________
consensus             ACTAGAATCGGAGAGACAAATCCTCTTTCAATCTAGAGGCAGAGAGCTTCGAATTGCAGC
 
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JMSF005N11-           AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
JMFF004P05-           AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
JMFF044H07-           AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
rJMFF037M13+          AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
JMFF012I09-           AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
JMFN006J10-           AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
rJMFF004P05+          AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
rJMFF040I08+          AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
rJMFF012I09+          AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
JMFN008P07-           AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
rJMFF044H07+          AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
                      ____________________________________________________________
consensus             AATGGCGGAAGAGAGCAACGCGCACAAGGAATACGTACCGCCACCGGTGTACGATTTGAA
 
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JMSF005N11-           CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
JMFF004P05-           CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTC  
JMFF044H07-           CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
rJMFF037M13+          CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
JMFF012I09-           CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
JMFN006J10-           CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
rJMFF004P05+          CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
rJMFF040I08+          CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
rJMFF012I09+          CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
JMFN008P07-           CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
rJMFF044H07+          CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
                      ____________________________________________________________
consensus             CGCTAAATGGGACGCATGCCTCGATTTGACCCTCCGCCGCGGCGTCTACTACTCCTTCGT
 
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JMSF005N11-           CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
JMFF044H07-           CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
rJMSF005N11+           GGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
rJMFF037M13+          CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
JMFF012I09-           CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
JMFN006J10-           CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
rJMFF004P05+          CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
rJMFF040I08+          CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
rJMFF012I09+          CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
JMFN008P07-           CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
rJMFF044H07+          CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
                      ____________________________________________________________
consensus             CGGTGCTTTTGGTGGCCTCCTCTTATTCAGGAGTCCTGCAGCACGTTGGGCTGCTATAGC
 
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JMSF005N11-           TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGA                     
JMFF044H07-           TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
rJMSF005N11+          TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
rJMFF037M13+          TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
JMFF012I09-           TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
JMFN006J10-           TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
rJMFF004P05+          TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
rJMFF040I08+          TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
rJMFF012I09+          TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
JMFN008P07-           TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
rJMFF044H07+          TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
                      ____________________________________________________________
consensus             TTTTGGTGCTGGAGCAGGTCTTGGATCTGCATACTCAGAATGCTCTTACAAATTTGCAAA
 
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JMFF044H07-           AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
rJMSF005N11+          AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
rJMFF037M13+          AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
JMFF012I09-           AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
JMFN006J10-           AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
rJMFF004P05+          AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
rJMFF040I08+          AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
rJMFF012I09+          AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
JMFN008P07-           AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
rJMFF044H07+          AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
                      ____________________________________________________________
consensus             AGATGGAGGTTTACCAGTTCCACATGTTTCTAATGCTTCAAAGGTGAGTACCGAGCAGGA
 
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JMFF044H07-           ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
rJMSF005N11+          ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
rJMFF037M13+          ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
JMFF012I09-           ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
JMFN006J10-           ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
rJMFF004P05+          ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
rJMFF040I08+          ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
rJMFF012I09+          ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
JMFN008P07-           ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
rJMFF044H07+          ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
                      ____________________________________________________________
consensus             ATGAAGTCCTCTTCCTTCACGGGTTTCACATACCAGTTTTTTCAAACTTGATGAGATTGT
 
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JMFF044H07-           TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
rJMSF005N11+          TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
rJMFF037M13+          TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
JMFF012I09-           TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
JMFN006J10-           TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
rJMFF004P05+          TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
rJMFF040I08+          TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
rJMFF012I09+          TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
JMFN008P07-           TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
rJMFF044H07+          TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
                      ____________________________________________________________
consensus             TGTTCACCCTTGTCTGTTCAGTGGCTCTCGCCTTTCATTATTGCAGGATTATTTTGAAAG
 
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JMFF044H07-           GTTAATTAGATTGTTCNAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
rJMSF005N11+          GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
rJMFF037M13+          GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
JMFF012I09-           G                                                           
JMFN006J10-           GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
rJMFF004P05+          GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
rJMFF040I08+          GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
rJMFF012I09+          GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
JMFN008P07-           GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
rJMFF044H07+          GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
                      ____________________________________________________________
consensus             GTTAATTAGATTGTTCAAAGCCACAAAGCTACTCATCATAAACGCCTCTGGCTTTTTTGT
 
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JMFF044H07-           CTGTAATTCTATTT                                              
rJMSF005N11+          CTG                                                         
rJMFF037M13+          CTGTAATTCTATTTACCAACCAAAGTTCAATAGGTAA                       
JMFN006J10-           CTGTAATTCTATTTACCAACCAAAGTTCAATAGGTAAAGTTAATAATT            
rJMFF004P05+          CTGTAATTCTATTTACCAACCAAAGTTCAATAGGTAAAGTTAATAATT            
rJMFF040I08+          CTGTAATTCTATTTACCAACCAAAGTTCAATAGGTAAAGTTAAT                
rJMFF012I09+          CTGTAATTCTATTTACCAACCAAAGTTCAATAGGTAAAGTTAATAATT            
JMFN008P07-           CTGTAATTCTATTTACCAACCAAAGTTCAATAGGTAAAGTTAATAATTTCTTCATTGGCC
rJMFF044H07+          CTGTAATTCTATTTACCAACCAAAGTTCAATAGGTAAAGTTAATAATTTCTTCATTGGCC
                      ____________________________________________________________
consensus             CTGTAATTCTATTTACCAACCAAAGTTCAATAGGTAAAGTTAATAATTTCTTCATTGGCC
 
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JMFN008P07-           CCTT                                                        
rJMFF044H07+          CCTTAGAGGCTTTGGAAAGACATCTTCTTCATGCAAAAAAAAAAAAAAACTCGCCAGGGT
                      ____________________________________________________________
consensus             CCTTAGAGGCTTTGGAAAGACATCTTCTTCATGCAAAAAAAAAAAAAAACTCGCCAGGGT